New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3293532 =24 (0.930)4 (0.160) 4/278 3.0 14.3% coding (2816/3675 nt) PP_2893 hypothetical protein
?NC_002947 3293608 = 25 (1.010)coding (2892/3675 nt) PP_2893 hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAGTGATCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3293615‑3293532
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaaGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAGCTGTCGTT  >  NC_002947/3293608‑3293751
                                                                                                                                                                                                                                    
CAGTGATCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGG                                                                                   >  2:83751/1‑147
      TCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAG                                                                            >  1:83278/1‑148
                                                   CATCGATCAGGCGCAAGGTCAGGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGA                                <  1:83751/147‑1
                                                                        GGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAG          <  2:83278/148‑1
                                                                                GCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAGCTGTCGTT  <  3:24163/148‑1
                                                                                                                                                                                                                                    
CAGTGATCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3293615‑3293532
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaaGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAGCTGTCGTT  >  NC_002947/3293608‑3293751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.