New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3293532 = | 24 (0.930) | 4 (0.160) | 4/278 | 3.0 | 14.3% | coding (2816/3675 nt) | PP_2893 | hypothetical protein |
? | NC_002947 | 3293608 = | 25 (1.010) | coding (2892/3675 nt) | PP_2893 | hypothetical protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CAGTGATCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3293615‑3293532 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaaGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAGCTGTCGTT > NC_002947/3293608‑3293751 CAGTGATCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGG > 2:83751/1‑147 TCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAG > 1:83278/1‑148 CATCGATCAGGCGCAAGGTCAGGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGA < 1:83751/147‑1 GGTCCGGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAG < 2:83278/148‑1 GCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAGCTGTCGTT < 3:24163/148‑1 CAGTGATCTTGCCCTTGGGTACCTGCACCTTGCCGGTCACCGCCAGCTTGTCATCGATCAGGCGCAAGGTCAGGTCCGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3293615‑3293532 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaaGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCGGCCGCGACAAGCTGTCGTT > NC_002947/3293608‑3293751 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |