New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 23014540 (0.000)59 (0.980) 45/278 0.5 100% intergenic (‑98/‑233) sbcD/PP_5497 exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
?NC_002947 5545321 = NA (NA)intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB

Only 100 of 112 total aligned reads displayed.

CTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACT  >  NC_002947/5545177‑5545465
                                                                                                                                                |                                                                                                                                                  
cTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTa                                                                                                                                                 <  5:85026/148‑1 (MQ=32)
 tGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTAt                                                                                                                                                >  3:16944/1‑148 (MQ=33)
  gCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATc                                                                                                                                               >  2:286093/1‑148 (MQ=34)
  gCCGGTCTTGGCTTATGCCTTCGAACTCCTCAAGACCTTGTTCAACAAAAGCCTGCTTATTGGTTAACAGGTTGTACACCAGACGTGCCAACTCATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATc                                                                                                                                               >  4:191145/1‑148 (MQ=11)
         ttGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATcaaacaa                                                                                                                                         >  5:234783/1‑147 (MQ=39)
           ggcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACaaaa                                                                                                                                       <  1:14276/147‑1 (MQ=40)
           ggcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAg                                                                                                                                      >  8:255726/1‑148 (MQ=255)
            gcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGAt                                                                                                                                    <  3:254033/149‑1 (MQ=255)
              ttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATaa                                                                                                                                  >  4:178790/1‑149 (MQ=255)
                   gcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTTCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCa                                                                                                                              <  3:245224/148‑1 (MQ=255)
                   gcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAcc                                                                                                                                <  3:334579/146‑1 (MQ=255)
                   gcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCAc                                                                                                                             >  8:340309/1‑149 (MQ=255)
                    cttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACt                                                                                                                            >  5:177429/1‑149 (MQ=255)
                     ttcGAACTCCTCAAGCCCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTCATGCGCAGTGGCTATGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAATGATAACCCTCTg                                                                                                                           >  8:204682/1‑149 (MQ=14)
                       cGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTg                                                                                                                           <  3:256003/147‑1 (MQ=255)
                         aaCTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttct                                                                                                                       >  6:352852/1‑149 (MQ=255)
                         aaCTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttct                                                                                                                       >  1:180999/1‑149 (MQ=255)
                            tcctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc                                                                                                                    >  3:351433/1‑149 (MQ=255)
                              ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACGAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc                                                                                                                    >  4:71280/1‑147 (MQ=255)
                              ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc                                                                                                                    <  4:351433/147‑1 (MQ=255)
                              ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa                                                                                                                  <  4:16944/149‑1 (MQ=255)
                               tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAg                                                                                                                 >  2:77002/1‑149 (MQ=255)
                                 aaGTCCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAg                                                                                                                 <  8:74322/147‑1 (MQ=255)
                                 aaGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTTCCAACTTATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGc                                                                                                                <  7:288765/148‑1 (MQ=255)
                                     ccTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaa                                                                                                            >  3:249332/1‑148 (MQ=255)
                                      cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttct                                                                                                                   >  3:302122/1‑140 (MQ=255)
                                      cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttct                                                                                                                   <  4:302122/140‑1 (MQ=255)
                                      cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaa                                                                                                           >  2:126220/1‑148 (MQ=255)
                                            cAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAg                                                                                                     <  1:158590/148‑1 (MQ=255)
                                               cATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgc                                                                                                 <  6:177429/149‑1 (MQ=255)
                                               cATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgc                                                                                                 >  1:101095/1‑149 (MQ=255)
                                               cATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgc                                                                                                 <  4:200930/149‑1 (MQ=255)
                                               cATAAGCATTCTTCTTGGTTAACAGGTTGTAAACCAGACGTGCCAACTGATTCGCACTGGCTTAGATGGAGCAGCTGGTATCAATTCGAGTCATTCTTCAATAAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGccgc                                                                                                 >  8:15916/1‑149 (MQ=18)
                                                  aaGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGcgcgcg                                                                                              >  3:18518/1‑149 (MQ=255)
                                                     ccTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgggg                                                                                           >  4:353680/1‑149 (MQ=255)
                                                     ccTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgggg                                                                                           <  6:234783/149‑1 (MQ=255)
                                                      cTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGt                                                                                          <  5:38967/149‑1 (MQ=255)
                                                         cttcttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCaa                                                                                       >  5:366240/1‑149 (MQ=255)
                                                             ttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATg‑‑gc                                                                                 >  4:255592/1‑149 (MQ=255)
                                                               ggTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc                                                                                                       <  2:240715/127‑1 (MQ=255)
                                                               ggTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATg‑‑gcg                                                                                <  2:180999/148‑1 (MQ=255)
                                                                gTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATg‑‑gcggc                                                                              >  3:100149/1‑149 (MQ=255)
                                                                gTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATg‑‑gcggc                                                                              >  7:212364/1‑149 (MQ=255)
                                                                 ttAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATg‑‑gcggc                                                                              >  4:191247/1‑148 (MQ=255)
                                                                   aaCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑gcggcg                                                                             >  6:316998/1‑147 (MQ=255)
                                                                    aCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc                                                                                                                    >  4:254538/1‑109 (MQ=255)
                                                                    aCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGaa                                                                           <  5:149789/148‑1 (MQ=255)
                                                                    aCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGaa                                                                           <  7:340309/148‑1 (MQ=255)
                                                                    aCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAg                                                                          <  3:178790/148‑1 (MQ=255)
                                                                     cAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAgt                                                                         <  2:101095/149‑1 (MQ=255)
                                                                     cAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAgt                                                                         <  7:81032/149‑1 (MQ=255)
                                                                        gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGtt                                                                      <  5:32467/149‑1 (MQ=255)
                                                                        gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGtt                                                                      >  2:79446/1‑149 (MQ=255)
                                                                         ttGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGtt                                                                      <  3:69270/148‑1 (MQ=255)
                                                                           gTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCa                                                                    <  3:353680/148‑1 (MQ=255)
                                                                               acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgggg                                                                                           >  2:225363/1‑123 (MQ=255)
                                                                               acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCActct                                                                >  2:211391/1‑148 (MQ=255)
                                                                               acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACtctt                                                               <  4:18518/149‑1 (MQ=255)
                                                                                 cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCActc                                                                 >  3:11248/1‑145 (MQ=255)
                                                                                 cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCActc                                                                 <  4:11248/145‑1 (MQ=255)
                                                                                 cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACtcttc                                                              >  7:178881/1‑148 (MQ=255)
                                                                                  aGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCAGTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCta                                                            <  7:204682/149‑1 (MQ=255)
                                                                                       tGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACa                                                                                                      <  7:187303/104‑1 (MQ=255)
                                                                                       tGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACa                                                                                                      >  8:187303/1‑104 (MQ=255)
                                                                                        gCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTg                                                      >  6:275548/1‑149 (MQ=255)
                                                                                         ccAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTgg                                                     <  7:323301/149‑1 (MQ=255)
                                                                                           aaCTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGTAGTGTTCACTCTTCTATACGTGGt                                                    >  2:124597/1‑148 (MQ=255)
                                                                                           aaCTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGt                                                    >  5:242501/1‑148 (MQ=255)
                                                                                           aaCTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTc                                                   >  8:214724/1‑149 (MQ=255)
                                                                                           aaCTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTc                                                   >  6:7252/1‑149 (MQ=255)
                                                                                                aTGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTcaca                                                <  6:366240/147‑1 (MQ=255)
                                                                                                    gcAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCAc                                                                   >  6:151710/1‑124 (MQ=255)
                                                                                                    gcAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCAc                                                                   <  5:151710/124‑1 (MQ=255)
                                                                                                      aGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGAGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCtg                                        >  1:83458/1‑149 (MQ=255)
                                                                                                        tGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCTCTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCAGTCTTGTATTCGTGGTCACAGCAAGCtgtg                                      <  1:77002/149‑1 (MQ=255)
                                                                                                          gCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTgg                                                     <  5:54796/132‑1 (MQ=255)
                                                                                                          gCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTgg                                                     >  6:54796/1‑132 (MQ=255)
                                                                                                          gCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCTTGCtgtgac                                    <  6:228313/149‑3 (MQ=255)
                                                                                                          gCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGc                                     <  2:117855/148‑1 (MQ=255)
                                                                                                          gCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTATATCAAACAAAAGATAACCCACTGTTCTTTCTAGCCAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGGGAAGTGTTCACTCTTCTATACGTGGTCACAGCACGCTGTGcc                                    <  3:191145/149‑1 (MQ=255)
                                                                                                                 tGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAggg                             <  5:352852/149‑1 (MQ=255)
                                                                                                                   gcgcAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGa                            <  3:136077/148‑1 (MQ=255)
                                                                                                                     gcAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGAtt                          >  7:302864/1‑148 (MQ=255)
                                                                                                                     gcAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATC‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGAtt                          >  1:265618/1‑148 (MQ=255)
                                                                                                                      cAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTaa                        >  2:174252/1‑149 (MQ=255)
                                                                                                                       aGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCTCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAAc                       <  7:255726/149‑1 (MQ=255)
                                                                                                                         cTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGc                     >  7:78625/1‑149 (MQ=255)
                                                                                                                            gTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGCCTCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGc                     <  1:286093/148‑1 (MQ=255)
                                                                                                                            gTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGTAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGcc                    <  1:124597/147‑1 (MQ=255)
                                                                                                                             tATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAt                 <  7:150682/149‑1 (MQ=255)
                                                                                                                             tATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAt                 <  4:249332/149‑1 (MQ=255)
                                                                                                                             tATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCAACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGCGGTCAATG‑‑GGGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAt                 <  2:17032/149‑1 (MQ=255)
                                                                                                                                 cATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCa             >  4:90500/1‑149 (MQ=40)
                                                                                                                                  aTTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACg                      >  6:236204/1‑139 (MQ=40)
                                                                                                                                  aTTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACg                      <  5:236204/139‑1 (MQ=40)
                                                                                                                                  aTTCGAGTCAGTCTTCTATCAAAAAAAAGATAACCAACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGAGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTCCAGACAGGGATTAACGCCGATGCCAt            >  3:142605/1‑149 (MQ=14)
                                                                                                                                   ttCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCAtt           <  1:174252/149‑1 (MQ=38)
                                                                                                                                     cGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTg         >  4:330267/1‑149 (MQ=37)
                                                                                                                                        gtcagtcTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACCTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGc      <  5:316998/149‑1 (MQ=21)
                                                                                                                                            gtcTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCAct  >  8:184484/1‑149 (MQ=31)
                                                                                                                                                |                                                                                                                                                  
CTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG‑‑GCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACT  >  NC_002947/5545177‑5545465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.