| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 330893 = | 77 (1.100) | 5 (0.080) | 5/266 | 8.4 | 6.7% | coding (783/2298 nt) | PP_0272 | ferric siderophore receptor |
| ? | NC_002947 | 330949 = | 66 (0.990) | coding (839/2298 nt) | PP_0272 | ferric siderophore receptor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTACTCGCCAAAGCTCCAGCTGGGCACCAGGTTGGTGCTGCGCGGCAAGTCGGTCTTGCTGCCGTCGCGGTACCAGATCGGGATGTTCGCGCCCCAGCCGCCACCCACGACCTTGTTGTACTCATACTGGTAACCGGCGCCGAGGGTGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/331047‑330893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcgGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGCGAGTACACCACCCGCACTGCGTTCGGTTCGCTCGAGCATCGCTTCGACAACGACTG > NC_002947/330949‑331096 TGTACTCGCCAAAGCTCCAGCTGGGCACCAGGTTGGTGCTGCGCGGCAAGTCGGTCTTGCTGCCGTCGCGGTACCAGATCGGGATGTTCGCGCCCCAGCCGCCACCCACGACCTTGTTGTACTCATACTGGTAACCGGCGCCGAGGGTG < 5:139768/149‑1 TGCCGTCGCGGTACCAGATCGGGATGTTCGCGCCCCAGCCGCCACCCACGACCTTGTTGTACTCATACTGGTAACCGGCGCCGAGGGTGGTGGCG > 5:283522/1‑95 TGCCGTCGCGGTACCAGATCGGGATGTTCGCGCCCCAGCCGCCACCCACGACCTTGTTGTACTCATACTGGTAACCGGCGCCGAGGGTGGTGGCG < 6:283522/95‑1 CCCAGCCGCCACCCACGACCTTGTTGTACTCATACTGGTAACCGGCGCCGAGGGTGGTGGCGGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCT > 2:100492/1‑149 CCGCCACCCACGACCTTGTTGTACTCATACTGGTAACCGGCGCCGAGGGTGGTGGCGGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGC > 3:79897/1‑149 GTTGTACTCATACTGGTAACCGGCGCCGAGGGTGGTGGCGGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGCGAGTACACCACCCGCA < 4:79897/148‑1 ACCGGCGCCGAGGGTGGTGGCGGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTGCCCCAGCTGGAGCTTTGGCGAGTACACCACCCGCACTGCGTTCGGTTCGCTC < 1:100492/148‑1 gtTGGTGGCGGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGCGAGTACACCACCCGCACTGCGTTCGGTTCGCTCGAGCATCGCTTCGA < 6:139768/147‑1 GTGGCGGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGCGAGTACACCACCCGCACTGCGTTCGGTTCGCTCGAGCATCGCTTCGACAAC < 4:382900/149‑1 CGGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGCGAGTACACCACCCGCACTGCGTTCGGTTCGCTCGAGCATCGCTTCGACAACGACT < 3:79454/149‑1 GGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGCGAGTACACCACCCGCACTGCGTTCGGTTCGCTCGAGCATCGCTTCGACAACGACTG > 3:30727/1‑149 TGTACTCGCCAAAGCTCCAGCTGGGCACCAGGTTGGTGCTGCGCGGCAAGTCGGTCTTGCTGCCGTCGCGGTACCAGATCGGGATGTTCGCGCCCCAGCCGCCACCCACGACCTTGTTGTACTCATACTGGTAACCGGCGCCGAGGGTGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/331047‑330893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcgGCTGGGGCGCGAACATCCCGATCTGGTACCGCGACGGCAGCAAGACCGACTTGCCGCGCAGCACCAACCTGGTG‑CCCAGCTGGAGCTTTGGCGAGTACACCACCCGCACTGCGTTCGGTTCGCTCGAGCATCGCTTCGACAACGACTG > NC_002947/330949‑331096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |