| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 5,674,753 | G→C | intergenic (+115/+25) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,674,753 | 0 | G | C | 98.8% | 272.5 / NA | 80 | intergenic (+115/+25) | rhlE‑II/yceI | ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (37/42); total (38/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCGCTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGC‑GCGC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTG > NC_002947/5674614‑5674886 | aGCGCTGCTGACCCACAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGt > 7:250414/1‑149 (MQ=255)aGCGCTGCTGACCCACAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGt > 7:244383/1‑149 (MQ=255) gcgcTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGtt > 3:61953/1‑149 (MQ=255) gctgctGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGtttt < 4:61953/149‑1 (MQ=255) ctgctgACCCTCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTc < 4:294592/149‑1 (MQ=255) tgctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGtttt > 2:205659/1‑147 (MQ=255) gctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAg < 5:321664/149‑1 (MQ=255) ctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGc < 4:255563/149‑1 (MQ=255) gACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTg > 2:19577/1‑149 (MQ=255) ccGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTgg > 3:323039/1‑147 (MQ=255) ccGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTgg > 1:255758/1‑147 (MQ=255) cacgggCTGATCGCCGTCCCGAGGGGGCTGCGTCGCAGCCCTATCACGACCCCCGGCCGCTCCTGCCGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGaa < 8:250414/146‑1 (MQ=25) cAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGaa < 8:244383/149‑1 (MQ=255) ggCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTa < 2:255758/149‑1 (MQ=255) gATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTc > 3:305483/1‑149 (MQ=255) aTAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCt > 7:78881/1‑149 (MQ=255) gTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTca < 5:78213/149‑1 (MQ=255) gTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTca > 4:33467/1‑149 (MQ=255) aCCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcaca > 7:148558/1‑149 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCacac < 3:33467/149‑1 (MQ=255) aGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt > 1:249181/1‑149 (MQ=255) gggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTc < 2:370536/149‑1 (MQ=255) ggCTGTTTGTCAGCCTTATCACTACACATGGCTGTTCATGATGACTATTTCTTTTTCTCTACTGTAGGGTCTTTGTTTCTTGATAGGGCCGAAATGGT‑TCCC‑CGTCGGTTTTCAGCTGGCATAAATTACTTCTGCTTCACACCTTAGac < 2:380504/149‑1 (MQ=255) gctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGaca > 2:386645/1‑149 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACt < 5:196522/147‑1 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTg < 4:305483/148‑1 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGa > 6:296970/1‑149 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGa < 1:205659/149‑1 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGa > 3:134640/1‑149 (MQ=255) ttCGCAGCCCTATCACGACACAAGGCCGCTCCTGGAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAT‑TGG‑GGGCGCCTCGGTTTTCAGGTGGCAGAAATTACTTCTGCTTCACAGCTTCGACACTgtt > 1:260568/1‑147 (MQ=37) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 4:134640/147‑1 (MQ=255) aGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc > 3:244876/1‑124 (MQ=255) aGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 4:244876/124‑1 (MQ=255) ccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 1:22194/1‑149 (MQ=255) tATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtc > 2:275767/1‑148 (MQ=255) aTCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtc > 2:295417/1‑147 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGacac < 2:163472/133‑1 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGacac > 1:163472/1‑133 (MQ=255) cACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtccagg > 1:32406/1‑149 (MQ=255) aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtccagg < 7:130920/148‑1 (MQ=255) cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat > 4:351937/1‑134 (MQ=255) cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 3:351937/134‑1 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCg < 2:139758/149‑1 (MQ=255) caAGCCCGCTCCTGCAGAGAAATTCTTGAACTCTACAGGAGCGGCCTTGTGTCGTGATACGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACATCAGCTTCACACCTTCGACACTGAAAACCAGGTCCAGGGTCTGCg < 2:260568/149‑1 (MQ=37) aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGaa < 4:323039/149‑1 (MQ=255) ggCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAg > 4:369469/1‑149 (MQ=255) ggCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAg < 8:148558/149‑1 (MQ=255) ggCCGCTCCTGCACAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAg < 8:287166/149‑1 (MQ=255) ccGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTa < 6:122219/149‑1 (MQ=255) ccGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTa < 7:46088/149‑1 (MQ=255) cGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAg > 2:180353/1‑149 (MQ=255) cGCTCCTGCAGAGAATTGCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAg < 6:396247/149‑1 (MQ=255) gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAg > 8:23754/1‑148 (MQ=255) tGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCg > 6:146544/1‑149 (MQ=255) cAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTTATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGTGTCTGCGAAGTAGCACCCgg < 7:347830/148‑1 (MQ=39) cAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtcc > 8:292485/1‑119 (MQ=255) cAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtcc < 7:292485/119‑1 (MQ=255) gaATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCtt < 5:146544/149‑1 (MQ=255) aaTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCttt < 4:41883/149‑1 (MQ=255) acttCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTg < 5:304707/147‑1 (MQ=255) cTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcac < 8:107920/90‑1 (MQ=25) cTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcac > 7:107920/1‑90 (MQ=25) tACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGaa < 1:275767/144‑1 (MQ=255) tACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAg < 8:78881/145‑1 (MQ=255) cAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt < 1:295417/148‑1 (MQ=255) ggAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcag < 3:369469/149‑1 (MQ=255) gCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggt > 3:243226/1‑148 (MQ=255) cTTGTGTCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACCCCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg < 4:243226/149‑1 (MQ=255) tgtCGTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggt > 7:341060/1‑149 (MQ=255) gTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACGCTGATATCCAGGTCCAGGGTCTGCGAAGTAGCCCGCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCGGCgtggtggtg > 6:263313/1‑149 (MQ=255) gTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtggtg < 6:363639/149‑1 (MQ=255) gTGATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtggtg > 3:69096/1‑149 (MQ=255) gATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGt > 3:155407/1‑124 (MQ=255) gATAGGGCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGt < 4:155407/124‑1 (MQ=255) ggCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCt < 3:171713/106‑1 (MQ=255) ggCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCt > 4:171713/1‑106 (MQ=255) ggCCGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTg > 5:48773/1‑148 (MQ=255) ccGCAA‑AGCGGCCC‑CCTAGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGGCTGCGATGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGTTTCAGCGTGGTGGTGGCGTTg > 6:173761/1‑146 (MQ=255) cGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGc > 6:363692/1‑110 (MQ=255) cGCAA‑AGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGc < 5:363692/110‑1 (MQ=255) | AGCGCTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAA‑AGC‑GCGC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTG > NC_002947/5674614‑5674886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |