Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,882,525	Δ1 bp	100%	intergenic (+13/‑67)	PP_2537 → / → PP_2538	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,882,525	0	G	.	86.4%	188.8 / 28.9	59	intergenic (+13/‑67)	PP_2537/PP_2538	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (5/3);  new base . (23/28);  total (28/31)
Fisher's exact test for biased strand distribution p-value = 4.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01
Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch.

AAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGGCCGCC  >  NC_002947/2882378‑2882660                                                                                                                                                     |                                                                                                                                        aaGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGATGCCTAGCCAGGCTTGCCTgg                                                                                                                                        <  3:67879/149‑1 (MQ=255)    gCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCTCGCGAAGGCGGGGGCGAAGCCTAGCCATGCTTGCCTggcta                                                                                                                                     <  6:160266/149‑4 (MQ=255)       aTCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTgggggcgc                                                                                                                                  >  6:265072/1‑146 (MQ=255)            cAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACt                                                                                                                            >  1:284824/1‑149 (MQ=255)               gCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTgg                                                                                                                         >  5:321225/1‑149 (MQ=255)                ccTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGc                                                                                                                        <  3:262068/149‑1 (MQ=255)                  tGACGACCGCCAGGTGATGATGAAGGTCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCAc                                                                                                                      >  6:67895/1‑149 (MQ=255)                      gacCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCtt                                                                                                                  >  3:94926/1‑149 (MQ=255)                        ccGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTg                                                                                                                 >  7:99467/1‑149 (MQ=255)                         cGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTgg                                                                                                                >  4:312645/1‑149 (MQ=255)                               gTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGttt                                                                                                         <  6:321225/149‑1 (MQ=255)                               gTGATGATGAACGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGCTCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCGAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGttt                                                                                                         <  4:241282/149‑1 (MQ=255)                                tgatgatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGttt                                                                                                         <  3:312645/149‑1 (MQ=255)                                   tgatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTa                                                                                                       <  8:99467/148‑1 (MQ=255)                                    gatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGttt                                                                                                         >  2:307127/1‑144 (MQ=255)                                    gatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGttt                                                                                                         <  1:307127/144‑1 (MQ=255)                                      tgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGt                                                                                                  <  8:80957/149‑1 (MQ=255)                                            ccAGGTAGTACGTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTaa                                                                                            >  2:285958/1‑149 (MQ=255)                                            ccACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTaa                                                                                            <  2:82830/149‑1 (MQ=255)                                             cACGTTCTACCTGGCCGGGATGGCCAATTCACTGTTCGACGGGCAGCTGCTCTTCTATACGTCTTTCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTaa                                                                                            <  1:270838/149‑1 (MQ=255)                                              aCGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAaca                                                                                          <  4:97213/149‑1 (MQ=255)                                                     acCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAg                                                                                    >  8:3588/1‑148 (MQ=255)                                                      ccTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGt                                                                                                           >  6:263102/1‑124 (MQ=255)                                                      ccTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGt                                                                                                           <  5:263102/124‑1 (MQ=255)                                                      ccTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGaa                                                                                  <  7:1041/149‑1 (MQ=255)                                                      ccTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGaa                                                                                  <  3:156883/149‑1 (MQ=255)                                                      ccTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGaa                                                                                  <  3:151853/149‑1 (MQ=255)                                                          gCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCt                                                                                                <  7:290912/131‑1 (MQ=255)                                                          gCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCt                                                                                                >  8:290912/1‑131 (MQ=255)                                                                 tGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCa                                                                       >  2:198563/1‑149 (MQ=255)                                                                  ggCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACa                                                                           >  6:189288/1‑144 (MQ=255)                                                                  ggCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACa                                                                           <  5:189288/144‑1 (MQ=255)                                                                         tCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTg                                                               <  6:92890/149‑1 (MQ=255)                                                                             tGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGa                                                            >  8:149371/1‑149 (MQ=255)                                                                              gATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGa                                                            >  2:271580/1‑148 (MQ=255)                                                                               aTCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGAc                                                           >  3:290504/1‑147 (MQ=255)                                                                                tCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAg                                                        <  1:285958/149‑1 (MQ=255)                                                                                  gACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGt                                                      >  3:227191/1‑149 (MQ=255)                                                                                   aCGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGt                                                      <  7:149371/149‑1 (MQ=255)                                                                                     ggCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGAc                                                           >  4:58997/1‑141 (MQ=255)                                                                                     ggCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGAc                                                           <  3:58997/141‑1 (MQ=255)                                                                                         aGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAg                                               >  7:42879/1‑149 (MQ=255)                                                                                          gctgct‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGc                                              <  5:265072/149‑1 (MQ=255)                                                                                          gctgct‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGc                                              <  4:290504/149‑1 (MQ=255)                                                                                             gct‑gcAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTtc                                           >  5:271339/1‑149 (MQ=255)                                                                                              ct‑gcAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTtc                                           >  2:195748/1‑148 (MQ=255)                                                                                              ct‑gcAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTtc                                           <  2:284824/148‑1 (MQ=255)                                                                                              ct‑gcAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTtc                                           <  1:195748/148‑1 (MQ=255)                                                                                                    gATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCtcgtcg                                     >  1:36654/1‑149 (MQ=255)                                                                                                         gTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGATGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTg                                >  7:140329/1‑149 (MQ=255)                                                                                                          tCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGc                               <  8:42879/149‑1 (MQ=255)                                                                                                                        gCGGGGGCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATg                 <  4:78041/149‑1 (MQ=255)                                                                                                                           ggggCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTc              <  7:3588/149‑1 (MQ=255)                                                                                                                             ggCGAAGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCt            <  2:36654/149‑1 (MQ=255)                                                                                                                              tcGATGCCTAGCCAGGCTTGCCT‑GGGGGCGCTAACTTGGCACCCTTGGGCGGTTTTACTCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGTGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTg           <  1:246233/148‑1 (MQ=255)                                                                                                                                  aGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTACCACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTgg       >  7:209911/1‑149 (MQ=255)                                                                                                                                  aGCCTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTgg       <  1:198563/149‑1 (MQ=255)                                                                                                                                   gCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTgg       >  7:44927/1‑149 (MQ=255)                                                                                                                                     gcccccAGGCAAGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGCCAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGgccg    >  8:234065/5‑149 (MQ=255)                                                                                                                                     cTAGCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGgccg    <  4:94926/149‑1 (MQ=255)                                                                                                                                        gCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGgccgcc  >  8:176550/1‑148 (MQ=255)                                                                                                                                        gCCAGGCTTGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGgccgcc  >  8:283979/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                        AAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCT‑GCAGATACGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTTGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGGCCGCC  >  NC_002947/2882378‑2882660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑