New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 530409	73 (1.410)	4 (0.080)	4/248	NT	5.6%	coding (323/960 nt)	birA	bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
	?	NC_002947	= 530450	65 (1.320)					coding (364/960 nt)	birA	bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA

GCCACTGGCGTTGCTTGAGGCGCAGGCAATCGCCGGATTCGCCGTGGGCGAACAGTGGCCGGTATTCATCCACGAAACCATCGATTCGACCAATGCCGAAGGCTTGCGCCTTGCCAGTGAAGGGCAGGCGGCTCCATTCCTGGTTCTGGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/530257‑530409 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgaCCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCTGGCGCTCAGCCAGAACCAGGAATGGAGCCGCCTGCCCTTCACTGGCAAGGCGCAAGCCTTCGGCATTGGTCGAATCGATGGTTTCGTGGATGAATACCGGCCACTGTTCGC  <  NC_002947/530450‑530304                                                                                                                                                                                                                                                                                                              GCCACTGGCGTTGCTTGAGGCGCAGGCAATCGCCGGATTCGCCGTGGGCGAACAGTGGCCGGTATTCATCCACGAAACCATCGATTCGACCAATGCCGAAGGCTTGCGCCTTGCCAGTGAAGGGCAGGCGGCTCCATTCCTGGTTCTGG                                                                                                                                                         <  6:308651/149‑1                      GCAGGCAATCGCCGGATTCGCCGTGGGCGAACAGTGGCCGGTATTCATCCACGAAACCATCGATTCGACCAATGCCGAAGGCTTGCGCCTTGCCAGTGAAGGGCAGGCGGCTCCATTCCTGGTTCTGGCTGACCCACTGCCGGCCGCGC                                                                                                                                    >  6:160487/1‑149                                         GCCGTGGGCGAACAGTGGCCGGTATTCATCCACGAAACCATCGATTCGACCAATGCCGAAGGCTTGCGCCTTGCCAGTGAAGGGCAGGCGGCTCCATTCCTGGTTCTGGCTGACCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCT                                                                                                                 >  7:144032/1‑149                                                        TGGCCGGTATTCATCCACGAAACCATCGATTCGACCAATGCCGAAGGCTTGCGCCTTGCCAGTGAAGGGCAGGCGGCTCCATTCCTGGTTCTGGCTGACCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCTGGCGCTCAGCCAGAA                                                                                                  <  5:160487/149‑1                                                          GCCGGTATTCATCCACGAAACCATCGATTCGACCAATGCCGAAGGCTTGCGCCTTGCCAGTGAAGGGCAGGCGGCTCCATTCCTGGTTCTGGCTGACCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCTGGCGCTCAGCCAGAAC                                                                                                 <  8:144032/148‑1                                                                                                                                                aaagGGCTGACCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCTGGCGCTCAGCCAGAACCAGGAATGGAGCCGCCTGCCCTTCACTGGCAAGGCGCAAGCCTTCGGCATTGGTCGAATCGATGGTTTCGTGGATGAATACCGGCCA          <  8:114331/145‑1                                                                                                                                                    GGCTGACCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCTGGCGCTCAGCCAGAACCAGGAATGGAGCCGCCTGCCCTTCACTGGCAAGGCGCAAGCCTTCGGCATTGGTCGAATCGATGGTTTCGTGGATGAATACCGGCCACTGT      <  1:175555/149‑1                                                                                                                                                         ACCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCTGGCGCTCAGCCAGAACCAGGAATGGAGCCGCCTGCCCTTCACTGGCAAGGCGCAAGCCTTCGGCATTGGTCGAATCGATGGTTTCGTGGATGAATACCGGCCACTGTTCGC  <  4:250691/148‑1                                                                                                                                                                                                                                                                                                              GCCACTGGCGTTGCTTGAGGCGCAGGCAATCGCCGGATTCGCCGTGGGCGAACAGTGGCCGGTATTCATCCACGAAACCATCGATTCGACCAATGCCGAAGGCTTGCGCCTTGCCAGTGAAGGGCAGGCGGCTCCATTCCTGGTTCTGGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/530257‑530409 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgaCCCACTGCCGGCCGCGCCGACCGCGTCCGGCGCTCTGGCGCTCAGCCAGAACCAGGAATGGAGCCGCCTGCCCTTCACTGGCAAGGCGCAAGCCTTCGGCATTGGTCGAATCGATGGTTTCGTGGATGAATACCGGCCACTGTTCGC  <  NC_002947/530450‑530304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.