New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 603905	56 (1.080)	3 (0.060)	3/246	NT	5.2%	coding (210/477 nt)	ribH	6,7‑dimethyl‑8‑ribityllumazine synthase
	?	NC_002947	= 603932	57 (1.170)					coding (237/477 nt)	ribH	6,7‑dimethyl‑8‑ribityllumazine synthase

GTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGGTACGCCACGGTGTCAGCGAAAGCGACATCACCATCATCCGTGCCCCGGGTGCATTCGAGATCCCGCTGGTGGCACAGAAGGTCGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/603753‑603905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagGGCGATGATCGCGTCGTAGGCGCCTTGCTGGGCGACCTTCTG  <  NC_002947/603932‑603891                                                                                                                                                                                                     GTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGGTACGCCACGGTGTCAGCGAAAGCGACATCACCATCATCCGTGCCCCGGGTGCATTCGAGATCCCGCTGGTGGCACAGAAGGTCG                                                 <  6:4577/148‑1  TGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGGTACGCCACGGTGTCAGCGAAAGCGACATCACCATCATCCGTGCCCCGGGTGCATTCGAGATCCCGCTGGTGGCACAGAAGGTCGCC                                               <  4:76931/149‑1                                     CTGGTAAGCGGTGCCGTTGATGCCCTGGTACGCCACGGTGTCAGCGAAAGCGACATCACCATCATCCGTGCCCCGGGTGCATTCGAGATCCCGCTGGTGGCACAGAAGGTCGCCCAGGGCGATGATCGCGTCGTAGGCGCCTTGCTGGG            <  3:144352/149‑1                                                                   CGCCACGGTGTCAGCGAAAGCGACATCACCATCATCCGTGCCCCGGGTGCATTCGAGATCCCGCTGGTGGCACAGAAGGTCGCCCAGGGCGATGATCGCGTCGTAGGCGCCTTGCTGGGCGACCTTCTG  >  7:144129/1‑129                                                                   CGCCACGGTGTCAGCGAAAGCGACATCACCATCATCCGTGCCCCGGGTGCATTCGAGATCCCGCTGGTGGCACAGAAGGTCGCCCAGGGCGATGATCGCGTCGTAGGCGCCTTGCTGGGCGACCTTCTG  <  8:144129/129‑1                                                                                                                                                                                                     GTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGGTACGCCACGGTGTCAGCGAAAGCGACATCACCATCATCCGTGCCCCGGGTGCATTCGAGATCCCGCTGGTGGCACAGAAGGTCGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/603753‑603905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagGGCGATGATCGCGTCGTAGGCGCCTTGCTGGGCGACCTTCTG  <  NC_002947/603932‑603891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.