New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 621350 | 59 (1.140) | 5 (0.100) | 5/246 | NT | 7.8% | coding (480/2178 nt) | PP_0535 | ferric siderophore receptor |
? | NC_002947 | = 621371 | 63 (1.290) | coding (501/2178 nt) | PP_0535 | ferric siderophore receptor |
CTGGCCAAGTACACCGCCGGCCTGCGCACCCTGACCAACGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/621198‑621350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcgCATGATTTCGACACGGTCGAACGCGGCCAGCGACGGTACGGTGCCAAAGATGCTGGCCATGGGGGCCGGCAGGCCATCGATGTTGAATTCGCTGTACTCGTAGCCACGGGCGTAGATCGACGAACGGCCGCTGTCGTTGGTCAGGGT < NC_002947/621371‑621225 CTGGCCAAGTACACCGCCGGCCTGCGCACCCTGACCAACGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGC > 7:25330/1‑149 GGCCAAGTACACCGCCGGCCTGCGCACCCTGACCAACGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCG > 3:228103/1‑149 GCCAAGTACACCGCCGGCCTGCGCACCCTGACCAACGACAGCGGCCTTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCG < 4:210073/148‑1 GCCAAGTACACCGCCGGCCTGCGCACCCTGACCAACGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGC > 2:121100/1‑149 GCCAAGTACACCGCCGGCCTGCGCACCCTGACCAACGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGC > 3:123199/1‑149 GCCTGCGCACCCTGACCAACGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGCGCATGATTTCGACACG > 7:227660/1‑149 CGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGCGCATGATTTCGACACGGTCGAACGCGGCCAGCGAC < 8:227660/149‑1 ATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGCGCATGATTTCGACACGGTCGAACGCGGCCAG > 5:63365/1‑126 ATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGCGCATGATTTCGACACGGTCGAACGCGGCCAG < 6:63365/126‑1 TCTACTCCCGTGGGTACGAGTTCAGCTAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTTCCGTCGCTGGCCGCGCATGATTTCGACTCGGTCGAACGCGGCCA < 6:133508/124‑1 CCGCGCATGATTTCGACACGGTCGAACGCGGCCAGCGACGGTACGGTGCCAAAGATGCTGGCCATGGGGGCCGGCAGGCCATCGATGTTGAATTCGCTGTACTCGTAGCCACGGGCGTAGATCGACGAACGGCCGCTGTCGTTGGTCAG < 6:293702/149‑1 GCGCATGATTTCGACACGGTCGAACGCGGCCAGCGACGGTACGGTGCCAAAGATGCTGGCCATGGGGGCCGGCAGGCCATCGATGTTGAATTCGCTGTACTCGTAGCCACGGGCGTAGATCGACCAACGACAGCGGCCGTTCGTCgatc < 6:134172/149‑5 CGCATGATTTCGACACGGTCGAACGCGGCCAGCGACGGTACGGTGCCAAAGATGCTGGCCATGGGGGCCGGCAGGCCATCGATGTTGAATTCGCTGTACTCGTAGCCACGGGCGTAGATCGACGAACGGCCGCTGTCGTTGGTCAGGGT < 5:317193/149‑1 CGCATGATTTCGACACGGTCGAACGCGGCCAGCGACGGTACGGTGCCAAAGATGCTGGCCATGGGGGCCAGCAGGCCCTCGATGTTGAAATAGCGGTACTAGTAGCCACGGGCGGTGCTAGACGCACGGCCGGGGTCGGTGGTCAGGGT > 1:266795/1‑149 CTGGCCAAGTACACCGCCGGCCTGCGCACCCTGACCAACGACAGCGGCCGTTCGTCGATCTACGCCCGTGGCTACGAGTACAGCGAATTCAACATCGATGGCCTGCCGGCCCCCATGGCCAGCATCTTTGGCACCGTACCGTCGCTGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/621198‑621350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcgCATGATTTCGACACGGTCGAACGCGGCCAGCGACGGTACGGTGCCAAAGATGCTGGCCATGGGGGCCGGCAGGCCATCGATGTTGAATTCGCTGTACTCGTAGCCACGGGCGTAGATCGACGAACGGCCGCTGTCGTTGGTCAGGGT < NC_002947/621371‑621225 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |