| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 724777 = | 51 (0.990) | 3 (0.060) | 3/252 | NT | 5.8% | coding (1122/1203 nt) | PP_0619 | branched‑chain amino acid ABC transporter substrate‑binding protein |
| ? | NC_002947 | 724805 = | 48 (0.960) | coding (1094/1203 nt) | PP_0619 | branched‑chain amino acid ABC transporter substrate‑binding protein | |||||
GCCGTGTCTGCGGCATTGCAGGGCATGCGCTTCCAGGGCCCGACCGGCGAAGAACTGATCCGCCCGGGTGACCACCAGGTGCTCAAGGACTACTACCTGCTGCGCGGCAAGCCCCAGGGGC‑AGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/724905‑724777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAGCGCATGCCCTGCAATGCCGCAGACACGGCGGCCCCGTCCAGGCTGCCGGCCTTGACGATGGCTTCGAGCATCACCT > NC_002947/724805‑724952 GCCGTGTCTGCGGCATTGCAGGGCATGCGCTTCCAGGGCCCGACCGGCGAAGAACTGATCCGCCCGGGTGACCACCAGGTGCTCAAGGACTACTACCTGCTGCGCATC‑TGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAG < 5:257869/149‑1 GCTGCGCGGCAAGCCCCAGGGGC‑AGATGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAA < 1:87513/102‑1 GCTGCGCGGCAAGCCCCAGGGGC‑AGATGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAA > 2:87513/1‑102 CAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAGCGCATGCCCTGCAATGCCGCAGACACGGCGGCCCCGTCCAGGCTGCCGGCCTTGACGATGGCTTCGAGCATCACCT > 1:219305/1‑149 CAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAGCGCATGCCCTGCAATGCCGCAGACACGGCGGCCCCGTCCAGGCTGCCGGCCTTGACGATGGCTTCGAGCATCACCT < 3:38991/149‑1 CAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAGCGCATGCCCTGCAATGCCGCAGACACGGCGGCCCCGTCCAGGCTGCCGGCCTTGACGATGGCTTCGAGCATCAC < 1:118176/147‑1 GCCGTGTCTGCGGCATTGCAGGGCATGCGCTTCCAGGGCCCGACCGGCGAAGAACTGATCCGCCCGGGTGACCACCAGGTGCTCAAGGACTACTACCTGCTGCGCGGCAAGCCCCAGGGGC‑AGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/724905‑724777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAGCGCATGCCCTGCAATGCCGCAGACACGGCGGCCCCGTCCAGGCTGCCGGCCTTGACGATGGCTTCGAGCATCACCT > NC_002947/724805‑724952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |