New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 823602	58 (1.120)	4 (0.080)	4/252	NT	6.7%	coding (1002/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase
	?	NC_002947	= 823631	56 (1.120)					coding (973/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase

ACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/823453‑823602 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgACCAGCCAGGCGCAATGGCTGAAGGTGGCCAGCTACTTTGCCACGGCGCGGGAAGAAGGTTTGCAGTGCCTGGCTGGCGGCCATGCACTGGACCGTGAAGGCTGGTTCGTCAGCCCGACGCTGTATACCGATGTGCCGAAAGACAG  <  NC_002947/823631‑823486                                                                                                                                                                                                                                                                                                          ACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCT                                                                                                                                                     <  3:108174/149‑1              TTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGACCAGCCAGGCG                                                                                                                                        >  4:191118/1‑149                                          CGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGACCAGCCAGGCGCAATGGCTGAAGGTGGCCAGCTACTTT                                                                                                             <  3:191118/148‑1                                                 TCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGACCAGCCAGGCGCAATGGCTGAAGGTGGCCAGCTA                                                                                                                 <  4:13503/137‑1                                                 TCGGTATACAGCGTCGGGCTGACGAAACAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGACCAGCCAGGCGCAATGGCTGAAGGTGGCCAGCTA                                                                                                                 >  3:13503/1‑137                                                                                                                                                    CTGACCAGCCAGGCGCAATGGCTGAAGGTGGCCAGCTACTTTGCCACGGCGCGGGAAGAAGGTTTGCAGTGCCTGGCTGGCGGCCATGCACTGGACCGTGAAGGCTGGTTCGTCAGCCCGACTCTGTATACCGATGTGCCGAAAGACAG  <  1:42467/149‑1                                                                                                                                                    CTGACCAGCCAGGCGCAATGGCTGAAGGTGGCCAGCTACTTTGCCACGGCGCGGGAAGAAGGTTTGCAGTGCCTGGCTGGCGGCCATGCACTGGACCGTGAAGGCTGGTTCGTCAGCCCGACGCTGTATACCGATGTGCCGAAAGACAG  <  5:189344/149‑1                                                                                                                                                                                                                                                                                                          ACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/823453‑823602 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgACCAGCCAGGCGCAATGGCTGAAGGTGGCCAGCTACTTTGCCACGGCGCGGGAAGAAGGTTTGCAGTGCCTGGCTGGCGGCCATGCACTGGACCGTGAAGGCTGGTTCGTCAGCCCGACGCTGTATACCGATGTGCCGAAAGACAG  <  NC_002947/823631‑823486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.