| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 842007 = | 56 (1.080) | 4 (0.080) | 4/248 | NT | 7.4% | coding (1043/1722 nt) | PP_0725 | TPR repeat‑containing protein |
| ? | NC_002947 | 842073 = | 47 (0.950) | coding (977/1722 nt) | PP_0725 | TPR repeat‑containing protein | |||||
GAACAAAGACTGGGATGAAGCCGAAGGCTACTTGCAGGAGCTGGTCGAGCGCGACAGCTACGTTGACGCCGCGCACCTGAACCTGGGCCGCATCCACGAGGAGCGCCACGACCCTGCTGGCGCTCTGCGTGAATACGCCCTGGTCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/842156‑842007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTGTTCTCCAGGCACACCAGCGCCAGCGAGTAGCGCAATTCGTCATCATCGGGGTATTGCTGGACCAGG > NC_002947/842073‑842219 GAACAAAGACTGGGATGAAGCCGAAGGCTACTTGCAGGAGCTGGTCGAGCGCGACAGCTACGTTGACGCCGCGCACCTGAACCTGGGCCGCATCCACGAGGAGCGCCACGACCCTGCTGGCGCTCTGCGTGAATACGCCCTGGTCGGCC > 2:8452/1‑149GAACAAAGACTGGGATGAAGCCGAAGGCTACTTGCAGGAGCTGGTCGAGCGCGACAGCTACGTTGACGCCGCGCACCTGAACCTGGGCCGCATCCACGAGGAGCGCCACGACCCTGCTGGCGCTCTCCGTGAATACGCCCTGCTCGGCC > 1:295684/1‑149 CTGGGCCGCATCCACGAGGAGCGCCACGACCCTGCTGGCGCTCTGCGTGAATACGCCCTGGTCGGCCCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTG > 6:223515/1‑149 TGGGCCGCATCCACGAGGAGCGCCACGACCCTGCTGGCGCTCTGCGTGAATACGCCCTGGTCGGCCCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCC > 1:273961/1‑140 TGGGCCGCATCCACGAGGAGCGCCACGACCCTGCTGGCGCTCTGCGTGAATACGCCCTGGTCGGCCCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCC < 2:273961/140‑1 TGCGTGAATACGCCCTGGTCGGCCCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTGTTCTCCAGGCACACCAGCGCCAGCGAGTAGCGCAATTCGTC < 5:223515/147‑1 CCCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTGTTCTCCAGGCACACCAGCGCCAGCGAGTAGCGCAATTCGTCATCATCGGGGTATTGCTGGACCAG > 5:188260/1‑149 CCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTGTTCTCCAGGCACACCAGCGCCAGCGAGTAGCGCAATTCGTCATCATCGGGGTATTGCTGGACCAGG > 7:213812/1‑149 CCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTGTTCTCCAGGCACACCAGCGCCAGCGAGTAGCGCAATTCGTCATCATCGGGGT < 1:16672/135‑1 CCAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTGTTCTCCAGGCACACCAGCGCCAGCGAGTAGCGCAATTCGTCATCATCGGGGT > 2:16672/1‑135 GAACAAAGACTGGGATGAAGCCGAAGGCTACTTGCAGGAGCTGGTCGAGCGCGACAGCTACGTTGACGCCGCGCACCTGAACCTGGGCCGCATCCACGAGGAGCGCCACGACCCTGCTGGCGCTCTGCGTGAATACGCCCTGGTCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/842156‑842007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccAGGTTCAGGTGCGCGGCGTCAACGTAGCTGTCGCGCTCGACCAGCTCCTGCAAGTAGCCTTCGGCTTCATCCCAGTCTTTGTTCTCCAGGCACACCAGCGCCAGCGAGTAGCGCAATTCGTCATCATCGGGGTATTGCTGGACCAGG > NC_002947/842073‑842219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |