| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1071845 = | 54 (1.050) | 5 (0.100) | 5/246 | NT | 10.0% | intergenic (‑25/+102) | PP_0929/gatB | lipoprotein/aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit B |
| ? | NC_002947 | 1071908 = | 39 (0.800) | intergenic (‑88/+39) | PP_0929/gatB | lipoprotein/aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit B | |||||
AGGCCAACCCGGGGCAGGTGAACCAATTGCTCAAAGCCAAGCTCGAAGGGTGATGGTTTTACCCCTGTAATGCTGCGAGGGCTTCGCCCTCGTTCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1071999‑1071845‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgaaCGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCTTGGCTTTGAGCAATTGGTTCACCTGCCCCGGGTTGGCCTTGCCTTTGGAGGCTTTCATGGCCTGGCCGACGAAGAAGCCGAACATCTTGCC > NC_002947/1071908‑1072051 AGGCCAACCCGGGGCAGGTGAACCAATTGCTCAAAGCCAAGCTCGAAGGGTGATGGTTTTACCCCTGTAATGCTGCGAGGGCTTCGCCCTCGTTCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACC > 5:79857/1‑149 GGCCAACCCGGGGCAGGTGAACCAATTGCTCAAAGCCAAGCTCGAAGGGTGATGGTTTTACCCCTGTAATGCTGCGAGGGCTTCGCCCTCGTTCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCC < 2:330247/149‑1 GCCAACCCGGGGCAGGTGAACCAATTGCTCAAAGCCAAGCTCGAAGGGTGATGGTTTTACCCCTGTAATGCTGCGAGGGCTTCGCCCTCGTTCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCCG < 6:69987/149‑1 CCTCGTTCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCCGCGAACGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCGTGGCTTTGAGCAATTGGTTCACCTGCCC > 5:179258/1‑149 CTCGTTCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCCGCGAACGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCTTGGCTTTGAGCAATTGGTTCACCTGCCCC > 5:331415/1‑149 TCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCCGCGAACGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCTTGGCTTTGAGCAATTGGTTCACCTGCCCCGGGTT > 5:47304/1‑149 CTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCCGCGAACGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCTTGGCTTTGAGCAATTGGTTCACCTGCCCCGGGTTGGCCTT < 6:47304/149‑1 CCAGCGTTCCCTGTAGGAGCGGATTTACCCGCGAACGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCTTGGCTTTGAGCAATTGGTTCACCTGCCCCGGGTTGGCCTTGCCTTTGGAGGCTTTCATGGC < 6:331415/149‑1 GCGAACGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCTTGGCTTTGAGCAATTGGTTCACCTGCCCCGGGTTGGCCTTGCCTTTGGAGGCTTTCATGGCCTGGCCGACGAAGAAGCCGAACATCTTGCC > 5:160032/1‑149 AGGCCAACCCGGGGCAGGTGAACCAATTGCTCAAAGCCAAGCTCGAAGGGTGATGGTTTTACCCCTGTAATGCTGCGAGGGCTTCGCCCTCGTTCGCGGCTGAAGCCGCTCCTACACAAGCCAGCGTTCCCTGTAGGAGCGGATTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1071999‑1071845‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgaaCGAGGGCGAAGCCCTCGCAGCATTACAGGGGTAAAACCATCACCCTTCGAGCTTGGCTTTGAGCAATTGGTTCACCTGCCCCGGGTTGGCCTTGCCTTTGGAGGCTTTCATGGCCTGGCCGACGAAGAAGCCGAACATCTTGCC > NC_002947/1071908‑1072051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |