New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1337176 | 56 (1.080) | 3 (0.060) | 3/248 | NT | 5.0% | coding (549/630 nt) | gstA | glutathione S‑transferase GstA |
? | NC_002947 | = 1337223 | 60 (1.220) | coding (596/630 nt) | gstA | glutathione S‑transferase GstA |
ACACCTTGCTCAAGGTGATCGATGCCGAGTTGGCCAATACGCCATTCCTGACGGGCAGCACACCCACCATAGCGGACATTGCCAACTACTCGTACATCGCTCACGCCCCCGAAGGCAACGTGTCGCTGGAGCCCTATGCCAATGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1337028‑1337176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcGGCATGGGGACGAAACGCGGCAGCGCCTCGATCCGCGCCAGCCAGTTGCGCACATTGGCATAGGGCTCCAGCGACACGTTGCCTTCGGGGGCGTGAGCGATGTACGAGTAGTTGGCAATGTCCGCTATGGTGGGTGTGCTGCCCGT < NC_002947/1337223‑1337078 ACACCTTGCTCAAGGTGATCGATGCCGAGTTGGCCAATACGCCATTCCTGACGGGCAGCACACCCACCATAGCGGACATTGCCAACTACTCGTACATCGCTCACGCCCCCGAAGGCAACGTGTCGCTGGAGCCCTATGCCAATGTGCG > 5:312708/1‑148 CATTCCTGACGGGCAGCACACCCACCATAGCGGACATTGCCAACTACTCGTACATCGCTCACGCCCCCGAAGGCAACGTGTCGCTGGAGCCCTATGCCAATGTGCGCGGCATGGGGACGAAACGCGGCAGCGCCTCGATCCGCGCCAGC > 1:155145/1‑149 CCCACCATAGCGGACATTGCCAACTACTCGTACATCGCTCACGCCCCCGAAGGCAACGTGTCGCTGGAGCCCTATGCCAATGTGCGCGGCATGGGGACGAAACGCGGCAGCGCCTCGATCCGCGCCAGCCAGTTGCGCACATTGGCATA < 2:155145/149‑1 CCACCATAGCGGACATTGCCAACTACTCGTACATCGCTCACGCCCCCGAAGGCAACGTGTCGCTGGAGCCCTATGCCAATGTGCGCGGCATGGGGACGAAACGCGGCAGCGCCTCGATCCGCGCCAGCCAGTTGCGCACATTGGCATAG < 3:100171/149‑1 cccgggGCGCGGCATGGGGACGAAACGCGGCAGCGCCTCGATCCGCGCCAGCCAGTTGCGCACATTGGCATAGGGCTCCAGCGACACGTTGCCTTCGGGGGCGTGAGCGATGTACGAGTAGTTGGCAATGTCCGCTATGGTGGGTGTG < 7:86204/142‑1 GCGGCATGGGGACGAAACGCGGCAGCGCCTCGATCCGCGCCAGCCAGTTGCGCACATTGGCATAGGGCTCCAGCGACACGTTGCCTTCGGGGGCGTGAGCGATGTACGAGTAGTTGGCAATGTCCGCTATGGTGGGTGTGCTGCCCGT > 1:123004/1‑148 ACACCTTGCTCAAGGTGATCGATGCCGAGTTGGCCAATACGCCATTCCTGACGGGCAGCACACCCACCATAGCGGACATTGCCAACTACTCGTACATCGCTCACGCCCCCGAAGGCAACGTGTCGCTGGAGCCCTATGCCAATGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1337028‑1337176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcGGCATGGGGACGAAACGCGGCAGCGCCTCGATCCGCGCCAGCCAGTTGCGCACATTGGCATAGGGCTCCAGCGACACGTTGCCTTCGGGGGCGTGAGCGATGTACGAGTAGTTGGCAATGTCCGCTATGGTGGGTGTGCTGCCCGT < NC_002947/1337223‑1337078 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |