| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1875246 | 57 (1.100) | 3 (0.060) | 3/252 | NT | 5.6% | coding (505/567 nt) | PP_1680 | alpha‑ribazole‑5'‑phosphate phosphatase |
| ? | NC_002947 | = 1875287 | 46 (0.920) | coding (546/567 nt) coding (11/756 nt) |
PP_1680 cobS |
alpha‑ribazole‑5'‑phosphate phosphatase adenosylcobinamide‑GDP ribazoletransferase |
|||||
GCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCATGCCGGCAAGCGCGTGCTGCTGGTGACCCATGGCGGCGTGATGCGGCTGTTACTGGCCCGTGCCCGTGGCTTGCCCAGGGAGCAGTTGCTGCAGGTCGAGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1875099‑1875246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgCCCATCGCCACCCGGCACCAGCCGCATCAACGCGCCATGGCCAACCTCGACCTGCAGCAACTGCTCCCTGGGCAAGCCACGGGCACGGGCCAGTAACAGCCGCATCACGCCGCCATGGGTCACCAGCAGCACGCGCTTGCCGGCAT < NC_002947/1875287‑1875142 GCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCATGCCGGCAAGCGCGTGCTGCTGGTGACCCATGGCGGCGTGATGCGGCTGTTACTGGCCCGTGCCCGTGGCTTGCCCAGGGAGCAGTTGCTGCAGGTCGAGGTTG < 8:211666/148‑1 CGGCAAGCGCGTGCTGCTGGTGACCCATGGCGGCGTGATGCGGCTGTTACTGGCCCGTGCCCGTGGCTTGCCCAGGGAGCAGTTGCTGCAGGTCGAGGTTGCCCATCGCCACCCGGCACCAGCCGCATCAACGCGCCATGGCCAACCT < 5:89887/148‑1 CGGCAAGCGCGTGCTGCTGGTGACCCATGGCGGCGTGATGCGGCTGTTACTGGCCCGTGCCCGTGGCTTGCCCAGGGAGCAGTTGCTGCAGGTCGAGGTTGCCCATCGCCACCCGGCACCAGCCGCATCAACGCGCCATGGCCAACCT > 6:89887/1‑148 CAAGCGCGTGCGGCTGGTGACCCATGGCGGCGTGATGCGGCTGTTACTGGCCCGTGCCCGTGGCTTGCCCAGGGAGCAGTTGCGGCAGGTCGAGGGTGCCCATCGCCACCCGGCACCAGCCGCATCAACGCGCCATGGCCAACCTCGAC < 7:55137/149‑1 TTGCCCATCGCCACCCGGCACCAGCCGCATCAACGCGCCATGGCCAACCTCGACCTGCAGCAACTGCTCCCTGGGCAAGCCACGGGCACGGGCCAGTAACAGCCGCATCACGCCGCCATGGGTCACCAGCAGCACGCGCTTGCCGGCAT < 2:322268/149‑1 GCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCATGCCGGCAAGCGCGTGCTGCTGGTGACCCATGGCGGCGTGATGCGGCTGTTACTGGCCCGTGCCCGTGGCTTGCCCAGGGAGCAGTTGCTGCAGGTCGAGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1875099‑1875246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgCCCATCGCCACCCGGCACCAGCCGCATCAACGCGCCATGGCCAACCTCGACCTGCAGCAACTGCTCCCTGGGCAAGCCACGGGCACGGGCCAGTAACAGCCGCATCACGCCGCCATGGGTCACCAGCAGCACGCGCTTGCCGGCAT < NC_002947/1875287‑1875142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |