New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2647348 = | 57 (1.100) | 3 (0.060) | 3/246 | NT | 5.5% | coding (658/687 nt) | ybbA | ABC transporter ATP‑binding protein |
? | NC_002947 | 2647389 = | 50 (1.020) | coding (617/687 nt) | ybbA | ABC transporter ATP‑binding protein |
CTGGCCCGCCGCTGCCGGCGCCAGATCCGCCTGGACGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2647390‑2647348 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggccAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGCTGATGCGTTCGCCGGTGTGGCTGTCGAGGTTACCGGTGGGCTCATCGGCGAACAGCACCGCAGGCTGCGCGGCG > NC_002947/2647389‑2647532 CTGGCCCGCCGCTGCCGGCGCCAGATCCGCCTGGACGCGGGCCAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGCTGATGCGTTCGCCGGTGTGGCTGTCGAGGTTACCGG > 3:229397/1‑149 GGCCCGCCGCTGCCGGCGCCAGATCCGCCTGGACGCGGGCCAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGC > 1:155308/1‑111 GGCCCGCCGCTGCCGGCGCCAGATCCGCCTGGACGCGGGCCAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGC < 2:155308/111‑1 GCGGGCCAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGCTGATGCGTTCGCCGGTGTGGCTGTCGAGGTTACCGGTGGGCTCATCGGCGAACAGCACCGCAGGCTGCGCGG < 4:229397/149‑1 GCCAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGCTGATGCGTTCGCCGGTGTGGCTGTCGAGGTTACCGGTGGGCTCATCGGCGAACAGCACCGCAGGCTGCGCGGCG > 4:287522/1‑147 CAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGCTGATGCGTTCGCCGGTGTGGCTGTCGAGGTTACCGGTGGGCTCATCGGCGAA < 1:77159/123‑1 CAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGCTGATGCGTTCGCCGGTGTGGCTGTCGAGGTTACCGGTGGGCTCATCGGCGAA > 2:77159/1‑123 CTGGCCCGCCGCTGCCGGCGCCAGATCCGCCTGGACGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2647390‑2647348 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggccAGGCGTTCGTCATGGGTGACCAGCACCAGGGTAGTGCCGCGCTCCTTGTTCAGCTCGAACAACAAGTCGCTGATGCGTTCGCCGGTGTGGCTGTCGAGGTTACCGGTGGGCTCATCGGCGAACAGCACCGCAGGCTGCGCGGCG > NC_002947/2647389‑2647532 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |