New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3190948 | 49 (0.950) | 4 (0.080) | 4/246 | NT | 7.7% | coding (1051/1254 nt) | PP_2800 | diaminobutyrate‑2‑oxoglutarate transaminase |
? | NC_002947 | = 3190996 | 50 (1.020) | coding (1003/1254 nt) | PP_2800 | diaminobutyrate‑2‑oxoglutarate transaminase |
TTCGAGCTGGTCGGTCGGGGTGTTCACCGGCGGCATCAGCTTGATGATTTCGCCATTCGGGCCGCAGCGGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3190796‑3190948 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAGGATGCCCAGCAGCGCGTTCTGCAAGCGGGCGTGCTGGTCGACCGCTGCGGCCCGAA < NC_002947/3190996‑3190851 TTCGAGCTGGTCGGTCGGGGTGTTCACCGGCGGCATCAGCTTGATGATTTCGCCATTCGGGCCGCAGCGGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGAT < 8:72290/147‑1 GAGCTGGTCGGTCGGGGTGTTCACCGGCGGCATCAGCTTGATGATTTCGCCATTCGGGCCGCAGCGGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGCCG < 3:229188/148‑1 GTCGGTCGGGGTGTTCACCGGCGGCATCAGCTTGATGATTTCGCCATTCGGGCCGCAGCGGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGC < 6:177927/140‑1 GTCGGTCGGGGTGTTCACCGGCGGCATCAGCTTGATGATTTCGCCATTCGGGCCGCAGCGGTCGACCAGCACGCCCGATTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGC > 5:177927/1‑140 GATGATTTCGCCATTCGGGCCGCAGCGGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGCCGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCG > 8:64885/1‑149 GCGGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGCCGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTT < 7:64885/149‑1 GGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGCCGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCAT > 3:1705/1‑141 GGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGCCGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCAT < 4:1705/141‑1 CCGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAGGATGCCCAGCAGCGCGTTCTGCAAGCGGGCGTGCTGGTCGACCGCTGCGGCCC > 7:101767/1‑148 CCGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAG > 5:146530/1‑95 CCGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAG < 6:146530/95‑1 CGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAGGATGCCCAGCAGCGCGTTCTGCAAGCGGGCGTGCTGGTCGACCGCTGCGGCCCG > 1:62078/1‑148 CGGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAGGATGCCCAGCAGCGCGTTCTGCAAGCGGGCGTGCTGGTCGACCGCTGCGGCCCG > 3:285896/1‑148 CGGCTTCGCGGAGATCCCGGGCG‑AGCCTCCGCCCGCTAGCGCGGCATGATCGCCGGCATAGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAGGATGCCCAGCAGCGCGTTATGCAAGCGGGCGTGCTGGTCGACCGCTGCGGCCCGAA > 7:204545/1‑149 GGCTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAGGATGCCCAGCAGCGCGTTCTGCAAGCGGGCGTGCTGGTCGACCGCTGCGGCCCGAA < 1:52592/149‑1 TTCGAGCTGGTCGGTCGGGGTGTTCACCGGCGGCATCAGCTTGATGATTTCGCCATTCGGGCCGCAGCGGTCGACCAGCACGCCCGCTTGCAGAACGCGCTGCTGGGCATCCTTGGCCAAGGCCACGTTGCCGCGGCCGAAATCGATGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3190796‑3190948 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcTTCGCGGAGATCCCGGGCGTCGCCTCCGCCCGCTCGCGCGGCATGATCGCCGGCATCGATTTCGGCCGCGGCAACGTGGCCTTGGCCAAGGATGCCCAGCAGCGCGTTCTGCAAGCGGGCGTGCTGGTCGACCGCTGCGGCCCGAA < NC_002947/3190996‑3190851 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |