New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3332679 | 55 (1.060) | 4 (0.080) | 4/238 | NT | 7.7% | coding (426/918 nt) | PP_2930 | L‑serine dehydratase |
? | NC_002947 | = 3332719 | 45 (0.950) | coding (386/918 nt) | PP_2930 | L‑serine dehydratase |
CAGCGACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3332523‑3332679 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcatccaccCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAATGGC < NC_002947/3332719‑3332574 CAGCGACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTT > 1:192002/1‑149 ACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACATCATC > 7:147198/1‑148 ATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGC > 3:115480/1‑149 ATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGA < 4:115480/149‑1 CCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCC > 3:53096/1‑87 CCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCC < 4:53096/87‑1 AGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTG > 1:279986/1‑125 AGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTG < 2:279986/125‑1 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTt < 4:52375/94‑2 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGC > 7:12230/1‑149 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTG > 3:52375/1‑94 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTG > 7:170153/1‑94 CTTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTG < 8:170153/94‑1 TTCATCCACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCG > 3:189722/1‑149 ACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCACGCGCAATGGC > 8:278927/1‑149 ACCCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAATGGC < 4:114503/149‑1 CAGCGACGCCGCGCCCTCGGTTTCTACCGCCAGCACAGGCACATCGCCCCAGCCATTGCGCTTGAGCCCCTCCACCACGCCACTGAGCAAGCCGCCCCCGCCGACTGACAACACCACCGCGTCCGGCTTCAGGCCGGCCTCGGCCACTTCATCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3332523‑3332679 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcatccaccCATTCGACGACCCACTGCTGTGGGCCGGGCATGCCAGCCTGGTGGATGAAGTGGCCGAGGCCGGCCTGAAGCCGGACGCGGTGGTGTTGTCAGTCGGCGGGGGCGGCTTGCTCAGTGGCGTGGTGGAGGGGCTCAAGCGCAATGGC < NC_002947/3332719‑3332574 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |