| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3357887 | 49 (0.950) | 3 (0.060) | 3/248 | NT | 5.6% | coding (935/1008 nt) | PP_2953 | alcohol dehydrogenase |
| ? | NC_002947 | = 3357931 | 54 (1.100) | coding (979/1008 nt) | PP_2953 | alcohol dehydrogenase | |||||
GCTGCACTGGGAGCTGATGTTCACCCGCTCGCTTTACGAAACCGACGACATGGTGCGCCAGCACGAGCTGCTCGAGCGCGTGGCCGGGCTGATCGATCAAGGCACCCTGCGTACCACCTTGGGCGAGCATTTCGGCGCCATCAATGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3357738‑3357887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGCGCCGAAATGCTCGCCCAAGGTGGTACGCAGGGTGCCTTGATCGATCAGCCCGGCCACGCGCTCGAGCAGCTCGTGCTGGCGCACCATG < NC_002947/3357931‑3357786 GCTGCACTGGGAGCTGATGTTCACCCGCTCGCTTTACGAAACCGACGACATGGTGCGCCAGCACGAGCTGCTCGAGCGCGTGGCCGGGCTGATCGATCAAGGCACCCTGCGTACCACCTTGGGCGAGCATTTCGGCGCCATCAATGCCG < 3:21980/149‑1GCTGCACTGGGAGCTGATGTTCACCCGCTCGCTTTACGAAACCGACGACATGGTGCGCCAGCACGAGCTGCTCGAGCGCGTGGCCGGGCTGATCGATCAAGGCACCCTGCGTACCACCTTGGGCGAGCATTTCGGCGCCATCAATGCCG > 6:286943/1‑149 TGCGCGAGCACGAGCTGCTCGAGCTCGTGGACGGGCTGATCGATCAAGGCACCCTGCGTACCACCTTGGGCGAGCATTTCGGCGCCATCAATGCCGCGCGCCTTGCCACTCTCGACCAGCGCATTGGCACGGCGCATGTTGCCGGCATT < 4:89158/149‑1 ATCAAGGCACCCTGCGTACCACCTTGGGCGAGCATTTCGGCGCCATCAATGCCGCGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGC < 7:6606/113‑1 ATCAAGGCACCCTGCGTACCACCTTGGGCGAGCATTTCGGCGCCATCAATGCCGCGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGC > 8:6606/1‑113 TGCCGCGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGCGCCGAAATGCTCGCCCAAGGTGGTACGCAGGGTGCCTTGATCGATCAGCCCGGCCACGCGCTCGAGCAGCTCGTGCTGGCGCAC > 4:152996/1‑148 GCCGCGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGCGCCGAAATGCTCGCCCAAGGTGGTACGCAGGGTGCCTTGATCGATCAGCCCGGCCACGCGCTCGAGCAGCTCGTGCTGGCGCACC < 4:136314/148‑1 GCCGCGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGCGCCGAAATGCTCGCCCAAGGTGGTACGCAGGGTGCCTTGATCGATCAGCCCGGCCACGCGCTCGAGCAGCTCGTGCTGGCGC < 2:77165/145‑1 CGCGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGCGCCGAAATGCTCGCCCAAGGTGGTACGCAGGGTGCCTTGATCGATCAGCCCGGCCACGCGCTCGAGCAGCTCGTGCTGGCGCACCATG > 6:203236/1‑149 GCTGCACTGGGAGCTGATGTTCACCCGCTCGCTTTACGAAACCGACGACATGGTGCGCCAGCACGAGCTGCTCGAGCGCGTGGCCGGGCTGATCGATCAAGGCACCCTGCGTACCACCTTGGGCGAGCATTTCGGCGCCATCAATGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3357738‑3357887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcGCGCCTTGCCACTCTCGACCAGCGCATGGGCACGGCGCATGTTGGCGGCATTGATGGCGCCGAAATGCTCGCCCAAGGTGGTACGCAGGGTGCCTTGATCGATCAGCCCGGCCACGCGCTCGAGCAGCTCGTGCTGGCGCACCATG < NC_002947/3357931‑3357786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |