New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 426105347 (0.910)4 (0.080) 4/242 NT 8.6% coding (1709/2460 nt) PP_3734 ABC transporter permease
?NC_002947 = 4261087 41 (0.850)coding (1675/2460 nt) PP_3734 ABC transporter permease

ACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4260900‑4261053
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggccaTTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTGGTGG  <  NC_002947/4261087‑4260943
                                                                                                                                                                                                                                                                                                           
ACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCAAGGCTGGCGTGCCTGCGGGCAGCTTCAGGATGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCT                                                                                                                                                        >  5:145968/1‑149
   AGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGG                                                                                                                                                      <  7:208112/148‑1
    GTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGG                                                                                                                                                      >  8:208112/1‑147
                                           CCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCATTGCAGGAACAGCATTCGCGCGCCTGGCAGCAACTGGC                                                                                                             <  6:136476/149‑1
                                               CACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGC                                                                                                         <  7:245900/149‑1
                                                       TGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCATTGCTGGAACAGCATTCGTGCGCCTGGCAGCAACTGGCCAGCGGACAAGC                                                                                                 >  7:115130/1‑149
                                                             GCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCATTGCTGGAACAGCATTCGTGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGA                                                                                            <  8:115130/148‑1
                                                                                                                                                  GCTGGCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCTATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTG      <  2:30168/149‑1
                                                                                                                                                  GCTGGCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTG      >  8:40736/1‑149
                                                                                                                                                   CTGGCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTGG     <  3:75225/149‑1
                                                                                                                                                   CTGGCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTGG     <  3:79610/149‑1
                                                                                                                                                    TGGCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCC                              >  1:158110/1‑123
                                                                                                                                                    TGGCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCC                              <  2:158110/123‑1
                                                                                                                                                      GCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTGGTGG  <  3:79878/149‑1
                                                                                                                                                      GCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTGGTGG  <  6:100939/149‑1
                                                                                                                                                      GCCATTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCGCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTGGTGG  <  8:142476/149‑1
                                                                                                                                                                                                                                                                                                           
ACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4260900‑4261053
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggccaTTGCTGGAACAGCATTCGCGCGCCTGGCAGCAACTGGCCAGCGGACAAGCCGTGATGCTCAGTGAGCAGTTGGCCAGGCGATTGAACCTGCAACTGGGTGACAGCCTGAAGCTGCCCGCAGGCACGCCAGCCATGCCCGTGGTGG  <  NC_002947/4261087‑4260943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.