| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4421594 | 44 (0.850) | 4 (0.080) | 4/244 | NT | 8.5% | coding (1344/1662 nt) | PP_3912 | DNA‑cytosine methyltransferase |
| ? | NC_002947 | = 4421633 | 45 (0.930) | coding (1383/1662 nt) | PP_3912 | DNA‑cytosine methyltransferase | |||||
GGGCCATGAACCACAGCGCCAGCCATCCCAACGCCGGCGGCCAGGTCGCCGTGTGCATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4421443‑4421594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccatcTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCTCGCCTGTGATGCACACGGCGAC < NC_002947/4421633‑4421487 GGGCCATGAACCACAGCGCCAGCCATCCCAACGCCGGCGGCCAGGTCGCCGTGTGCATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGC > 1:93393/1‑148GGGCCATGAACCACAGCGCCAGCCATCCCAACGCCGGCGGCCAGGTCGCCGTGTACATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCC < 3:143371/149‑1 gcaATGAACCACAGCGCCAGCCATCCCAACCCCGGCCGCCAGCTCGCCGTGTGCATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGAGAAGACGCCACGGGCCGTGGGCAGCCAATCGTTGCACACGCCA > 8:7326/4‑148 GCCATGAACCACAGCGCCAGCCATCCCAACGCCGGCGGCCAGGTCGCCGTGTGCATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCCAT > 5:129794/1‑149 GCCATCCCAACGCCGGCGGCCAGGTCGCCGTGTGCATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCCATCTGGACCGCTCGCTGGGTT > 6:299841/1‑149 GCCGTGTGCATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATG < 5:299841/148‑1 GCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTG < 1:118139/127‑1 GCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTG > 2:118139/1‑127 GCCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCTCGCCTGTGATGCACACGG < 4:205012/149‑1 GCCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTC > 7:156793/1‑115 GCCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTC < 8:156793/115‑1 CCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCTCGCCTGTGATGCACACGGC < 1:236909/149‑1 CCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCT < 5:92924/130‑1 CCATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCT > 6:92924/1‑130 CATCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCTCGCCTGTGATGCACACGGC > 2:261136/1‑148 TCTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCTCGCCTGTGATGCACACGGCGAC > 1:20542/1‑149 GGGCCATGAACCACAGCGCCAGCCATCCCAACGCCGGCGGCCAGGTCGCCGTGTGCATCACAGGCGAGATCACGCACACGCTGAAGGCCGAGGGCTTTGATGCCAGCGAAGACGGCACGGGCCGTGGGCAGCCAATCGTTGCTCACGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4421443‑4421594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccatcTGGACCGCTCGCTGGGTTTTCGCGCAGAGCGCCGGCCTGGATGGCGTGAGCAACGATTGGCTGCCCACGGCCCGTGCCGTCTTCGCTGGCATCAAAGCCCTCGGCCTTCAGCGTGTGCGTGATCTCGCCTGTGATGCACACGGCGAC < NC_002947/4421633‑4421487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |