| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4898331 = | 66 (1.280) | 3 (0.060) | 3/250 | NT | 4.6% | coding (213/957 nt) | PP_4306 | hypothetical protein |
| ? | NC_002947 | 4898386 = | 60 (1.210) | coding (158/957 nt) | PP_4306 | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACCTGCTTGCCGCCCTCGACCCTGCCCCACAGGAAACCCGCCGCCTGTTCCACGGTCGCGGCCGCTGCTGGCAGGGCCTGGAGCAGGTCACCGTCGACTGGCTGCAGGGCGTGCTGTCGGTCGCCTTGTTCCGTGAGCCGCCCGAAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4898483‑4898331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagTCGACGGTGACCTGCTCCAGGCCCTGCCAGCAGCGGCCGCGACCGTGGAACAGGCGGCGGGTTTCCTGTGGGGCAGGGTCGAGGGCGGCAAGCAGGTGTTGCTCAAGG > NC_002947/4898386‑4898493 CACCTGCTTGCCGCCCTCGACCCTGCCCCACAGGAAACCCGCCGCCTGTTCCACGGTCGCGGCCGCTGCTGGCAGGGCCTGGAGCAGGTCACCGTCGACTGGCTGCAGGGCGTGCTGTCGGTCGCCTTGTTCCGTGAGCCGCCCGAAGG > 3:57159/1‑149 ACCTGCTTGCCGCCCTCGACCCTGCCCCACAGGAAACCCGCCGCCTGTTCCACGGTCGCGGCCGCTGCTGGCAGGGCCTGGAGCAGGTCACCGTCGACTGGCTGCAGGGCGTGCTGTCGGTCGCCTTGTTCCGTGAGCCGCCCGAAGGC < 5:31154/149‑1 CCTGCTTGCCGCCCTCGACCCTGCCCCACAGGAAACCCGCCGCCTGTTCCACGGTCGCGGCCGCTGCTGGCAGGGCCTGGAGCAGGTCACCGTCGACTGGCTGCAGGGCGTGCTGTCGGTCGCCTTGTTCCGTGAGCCGCCCGAAGGCC < 7:143910/149‑1 ACTGGCTGCAGGGCGTGCTGTCGGTCGCCTTGTTCCGTGAGCCTCCCGAAGGCCAGTCGACGGTGACCTGCTCCAGGCCCTGCCAGCAGCGGCCGCGACCGTGGAACAGGCGGCGGGTTTCCTGTGGGGCAGGGTCGAGGGCGGCAAG > 6:180100/1‑148 CTGCAGGGCGTGCTGTCGGTCGCCTTGTTCCGTGAGCCGCCCGAAGGCCAGTCGACGGTGACCTGCTCCAGGCCCTGCCAGCAGCGGCCGCGACCGTGGAACAGGCGGCGGGTTTCCTGTGGGGCAGGGTCGAGGGCGGCAAGCAGGTG > 4:245698/1‑149 TGCTGTCGGTCGCCTTGTTCCGTGAGCCGCCCGAAGGCCAGTCGACGGTGACCTGCTCCAGGCCCTGCCAGCAGCGGCCGCGACCGTGGAACAGGCGGCGGGTTTCCTGTGGGGCAGGGTCGAGGGCGGCAAGCAGGTGTTGCTCAAGG < 3:245698/149‑1 CCAGTCGACGGTGACCTGCTCCAGGCCCTGCCAGCAGCGGCCGCGACCGTGGAACAGGCGGCGGGTTTCCTGTGGGGCAGGGTCGAGGGCGGCAAGCAGGTGTTGCTCAA < 3:154907/110‑1 CCAGTCGACGGTGACCTGCTCCAGGCCCTGCCAGCAGCGGCCGCGACCGTGGAACAGGCGGCGGGTTTCCTGTGGGGCAGGGTCGAGGGCGGCAAGCAGGTGTTGCTCAA > 4:154907/1‑110 CACCTGCTTGCCGCCCTCGACCCTGCCCCACAGGAAACCCGCCGCCTGTTCCACGGTCGCGGCCGCTGCTGGCAGGGCCTGGAGCAGGTCACCGTCGACTGGCTGCAGGGCGTGCTGTCGGTCGCCTTGTTCCGTGAGCCGCCCGAAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4898483‑4898331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagTCGACGGTGACCTGCTCCAGGCCCTGCCAGCAGCGGCCGCGACCGTGGAACAGGCGGCGGGTTTCCTGTGGGGCAGGGTCGAGGGCGGCAAGCAGGTGTTGCTCAAGG > NC_002947/4898386‑4898493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |