New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5764064	56 (1.080)	4 (0.080)	4/252	NT	6.4%	coding (45/1317 nt)	ctpA	carboxy‑terminal‑processing protease
	?	NC_002947	= 5764144	63 (1.260)					coding (125/1317 nt)	ctpA	carboxy‑terminal‑processing protease

ACCCTTCGCAGTGGTGCCGGGGCTAGTCAAATTTCTACGGCGCAGCCTGAGTGCTGCGCCGATGCTCCCCAGGGAGCGCTTACAGGATCAGGAGTTCGTTCGACATGCTGCACTCGCCTCGTCTCACCCAGCTGGCCCTGTCCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5763916‑5764064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccTTGGCGGTCACCTCGGTGGCTGGCACTGCAGCGGCCTTGGCCGGCTCTGCGGCGGTGGCCAGGGGCGCGCCGACCGCCAGGGCGATGGACAGGGCCAGCTGGGTGAGACGAGGCGAGTGCAGCATGTCGAACGAACTCCTGATCCT  <  NC_002947/5764144‑5763999                                                                                                                                                                                                                                                                                                         ACCCTTCGCAGTGGTGCCGGGGCTAGTCAAATTTCTACGGCGCAGCCTGAGTGCTGCGCCGATGCTCCCCAGGGAGCGCTTACAGGATCAGGAGTTCGTTCGACATGCTGCACTCGCCTCGTCTCACCCAGCTGGCCCTGTCCATCGCC                                                                                                                                                    >  2:53718/1‑149                                                                    CCCAGGGAGCGCTTGCAGGATCAGGAGTTCGTTCGACATGCTGCACTCGCCTCGTCTCACCCAGCTGGCCCTGTCCATCGCCTTGGCGGTCACCTCGGTGGCTGGCACTGCAGCGGCCTTGGCCGGCTCTGCGGCGGTGGCCAGGGGCG                                                                                 >  7:277585/1‑149                                                                                    AGGATCAGGAGTTCGTTCGACATGCTGCACTCGCCTCGTCTCACCCAGCTGGCCCTGTCCATCGCCTTGGCGGTCACCTCGGTGGCTGGCACTGCAGCGGCCTTGGCCGGCTCTGCGGCGGTGGCCAGGGGCGCGCCGACCGCCAGGGC                                                                 >  8:271234/1‑149                                                                                      GATCAGGAGTTCGTTCGACATGCTGCACTCGCCTCGTCTCACCCAGCTGGCCCTGTCGATCGCCTTGGCGGTCACCTCGGTGGCTGGCACTGCAGCGGCCTTGGCCGGCTCTGCGGCGGTGGCCAGGGGCGCGCCGACCGCCAGGGCGA                                                               <  8:277585/149‑1                                                                                        TCAGGAGTTCGTTCGACATGCTGCACTCGCCTCGTCTCACCCAGCTGGCCCTGTCCATCGCCTTGGCGGTCACCTCGGTGGCTGGCACTGCAGCGGCCTTGGCCGGCTCTGCGGCGGTGGCCAGGGGCGCGCCGACCGCCAGGGCGATG                                                             <  7:271234/149‑1                                                                                                                                                   GCCTTGGCGGTCACCTCGGTGGCTGGCACTGCAGCGGCCTTGGCCGGCTCTGCGGCGGTGGCCAGGGGCGCGCCGACCGCCAGGGCGATGGACAGGGCCAGCTGGGTGAGACGAGGCGAGTGCAGCATGTCGAACGAACTCCTGATCCT  >  7:221708/1‑149                                                                                                                                                                                                                                                                                                         ACCCTTCGCAGTGGTGCCGGGGCTAGTCAAATTTCTACGGCGCAGCCTGAGTGCTGCGCCGATGCTCCCCAGGGAGCGCTTACAGGATCAGGAGTTCGTTCGACATGCTGCACTCGCCTCGTCTCACCCAGCTGGCCCTGTCCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5763916‑5764064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccTTGGCGGTCACCTCGGTGGCTGGCACTGCAGCGGCCTTGGCCGGCTCTGCGGCGGTGGCCAGGGGCGCGCCGACCGCCAGGGCGATGGACAGGGCCAGCTGGGTGAGACGAGGCGAGTGCAGCATGTCGAACGAACTCCTGATCCT  <  NC_002947/5764144‑5763999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.