New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5818359 = | 57 (1.100) | 3 (0.060) | 3/242 | NT | 5.5% | coding (353/687 nt) | PP_5094 | PLP binding domain‑containing protein |
? | NC_002947 | 5818398 = | 50 (1.040) | coding (392/687 nt) | PP_5094 | PLP binding domain‑containing protein |
GGTCTTCGGTGGGTTCCGGGATTGCCATCAGCCCGCGCAGGCGCAGGTTGGGCAGTGCGGCTACGGCTTTGGCCAACGCGGGTAGGTCGGCTGGGGTGCAGCCGGATTTACTGTCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818514‑5818359 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCA > NC_002947/5818398‑5818505 GGTCTGCGGTGGGTTCCGGGATTGCCATCAGCCCGCGCAGGCGCAGGTTGGGCAGTGCGGCTACGGCTTTGGCCAACGCGGGTAGGTCGGCTGGGGTGCAGCCGGATTTACTGTCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTC < 8:232746/149‑1 TCTTCGGTGGGTTCCGGGATTGCCATCAGCCCGCGCAGGCGCAGGTTGGGCAGTGCGGCTACGGCTTTGGCCAACGCGGGTAGGTCGGCTGGGGTGCAGCCGGATTTACTGTCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAG > 6:206164/1‑149 CTTCGGTGGGTTCCGGGATTGCCATCAGCCCGCGCAGGCGCAGGTTGGGCAGTGCGGCTACGGCTTTGGCCAACGCGGGTAGGTCGGCTGGGGTGCAGCCGGATTTACTGTCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGC < 2:175420/149‑1 TTCGGTGGGTTCCGGGATTGCCATCAGCCCGCGCAGGCGCAGGTTGGGCAGTGCGGCTACGGCTTTGTCCAACGCGGGTAGGTCGGCTGGGGTGCAGCCGGATTTACTGTCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCG > 4:156718/1‑149 TTCGGTGGGTTCCGGGATTGCCATCAGCCCGCGCAGGCGCAGGTTGGGCAGTGCGGCTACGGCTTTGGCCAACGCGGGTAGGTCGGCTGGGGTGCAGCCGGATTTACTGTCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCG > 3:265081/1‑149 TCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGG > 7:236769/1‑129 TCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGG < 8:236769/129‑1 TTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCA > 5:11146/1‑149 GGTCTTCGGTGGGTTCCGGGATTGCCATCAGCCCGCGCAGGCGCAGGTTGGGCAGTGCGGCTACGGCTTTGGCCAACGCGGGTAGGTCGGCTGGGGTGCAGCCGGATTTACTGTCTTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818514‑5818359 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCA > NC_002947/5818398‑5818505 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |