| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5874406 | 60 (1.160) | 4 (0.080) | 4/246 | NT | 6.3% | coding (103/426 nt) | PP_5148 | membrane protein |
| ? | NC_002947 | = 5874439 | 62 (1.270) | coding (70/426 nt) | PP_5148 | membrane protein | |||||
GATGCCAACACCCAGGTCTGCCCCAGTGGCCAGCCCACCAGGTGTACCAGCCACCAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5874252‑5874406‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctgGGCCTGGCGATCTGGACCTGGCGCGCTCGCCGTCAGGGCGATGCCGAAGCCTACGCCAAGCTGCTGCGCCGGCCGTTGGTGTTCGTCTGGTTGGTGATGGGCCTGTGCCTGGTGAGCATGCCGTTCACCGGCTGGTGGCTGGTACACC < NC_002947/5874439‑5874292 GATGCCAACACCCAGGTCTGCCCCAGTGGCCAGCCCACCAGGTGTACCAGCCACCAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCACCGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATC > 7:219986/1‑149 GCCAACACCCAGGTCTGCCCCAGTGGCCAGCCCACCAGGTGTACCAGCCACCAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCC > 7:232558/1‑149 CAACACCCAGGTCTGCCCCAGTGGCCAGCCCACCAGGTGTACCAGCCACCAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCT > 2:238097/1‑149 AACACCCAGGTCTGCCCCAGTGGCCAGCCCACCAGGTGTACCAGCCACCAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCACCGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCTG > 5:279662/1‑149 CAGCCACCAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCTGGGCCTGGCGATCTGGACCTGGCGCGCTCGCCGTCAGGGCGA < 7:290976/149‑1 CAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCTGGGCCTGGCGATCTGGACCTGGCGCGCTCGCCGTCAGGGCGATGCCGAA < 2:255478/149‑1 ACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCTGGGCCTGGCGATCTGGGCCTGGCGCGCTCGCCGTCAGGGCGATG > 3:274052/1‑116 ACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCTGGGCCTGGCGATCTGGGCCTGGCGCGCTCGCCGTCAGGGCGATG < 4:274052/116‑1 GCCCTGGGCCTGGCGATCTGGACCTGGCGCGCTCGCCGTCAGGGCGATGCCGAAGCCTACGCCAAGCTGCTGCGCCGGCCGTTGGTGTTCGTCTGGTTGGTGATGGGCCTGTGCCTGGTGAGCATGCCGTTCACCGGCTGGTGGCTGG > 8:232558/1‑148 CCTGGGCCTGGCGATCTGGACCTGGCGCGCTCGCCGTCAGGGCGATGCCGAAGCCTACGCCAAGCTGCTGCGCCGGCCGTTGGTGTTCGTCTGGTTGGTGATGGGCCTGTGCCTGGTGAGCATGCCGTTCACCGGCTGGTGGCTGGTAC < 2:141133/149‑1 GGGCCTGGCGATCTGGACCTGGCGCGCTCGCCGTCAGGGCGATGCCGAAGCCTACGCCAAGCTGCTGCGCCGGCCGTTGGTGTTCGTCTGGTTGGTGATGGGCCTGTGCCTGGTGAGCATGCCGTTCACCGGCTGGTGGCTGGTACACC < 6:328238/149‑1 GATGCCAACACCCAGGTCTGCCCCAGTGGCCAGCCCACCAGGTGTACCAGCCACCAGCCGGTGAACGGCATGCTCACCAGGCACAGGCCCATCACCAACCAGACGAACACCAACGGCCGGCGCAGCAGCTTGGCGTAGGCTTCGGCATCGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5874252‑5874406‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctgGGCCTGGCGATCTGGACCTGGCGCGCTCGCCGTCAGGGCGATGCCGAAGCCTACGCCAAGCTGCTGCGCCGGCCGTTGGTGTTCGTCTGGTTGGTGATGGGCCTGTGCCTGGTGAGCATGCCGTTCACCGGCTGGTGGCTGGTACACC < NC_002947/5874439‑5874292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |