New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 222422 =70 (1.360)4 (0.080) 4/248 NT 6.1% coding (277/1020 nt) PP_0170 ABC transporter substrate‑binding protein
?NC_002947 222477 = 56 (1.140)coding (332/1020 nt) PP_0170 ABC transporter substrate‑binding protein

CGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGACATCTCCGACA  >  NC_002947/222274‑222569
                                                                                                                                                    |                                                                                                                                                   
tgcaggaagcgcgactgcaccgaaacacccaccgccggaacggcgatacggtctttgtcggagatgtcggcgatggtcttcacgttggggttgctgctgaccaggtagtacgggaagttgcccagcgaagccccggccttcacgttctg                                                                                                                                                     <  5:257825‑M1/1‑1 (MQ=255)
cGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATcg                                                                                                                                                     >  2:44157/1‑149 (MQ=255)
   cTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATcgccg                                                                                                                                                  >  5:141285/1‑149 (MQ=255)
    ggaagcgcgactgcaccgaaacacccaccgccggaacggcgatacggtctttgtcggagatgtcggcgatggtcttcacgttggggttgctgctgaccaggtagtacgggaagttgcccagcgaagccacggccttcacgttctGCCgg                                                                                                                                                 <  1:12041‑M1/5‑1 (MQ=255)
       ctgctgctgAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACTGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATcgccggcgc                                                                                                                                              >  2:287018/1‑149 (MQ=255)
        tgctgctgAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATcgccggcgcc                                                                                                                                             >  8:56599/1‑149 (MQ=255)
         gctgctgAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATcgccggcgccg                                                                                                                                            >  4:205787/1‑149 (MQ=255)
            gctgAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGgtg                                                                                                                                         >  3:122854/1‑149 (MQ=255)
                               cAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGt                                                                                                                      >  6:131099/1‑149 (MQ=255)
                                   aCCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTgg                                                                                                                  >  1:21023/1‑149 (MQ=255)
                                    ccTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTggg                                                                                                                 <  1:287018/149‑1 (MQ=255)
                                     cTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGa                                                                                                                <  3:205787/149‑1 (MQ=255)
                                     cTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCAGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGa                                                                                                                >  3:108351/1‑149 (MQ=255)
                                     cTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGACGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTggg                                                                                                                 >  1:266652/1‑148 (MQ=255)
                                      tGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGAc                                                                                                               >  7:131401/1‑149 (MQ=255)
                                         ttGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGc                                                                                                            <  6:141285/149‑1 (MQ=255)
                                           gagaAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCAc                                                                                                          >  4:8176/1‑149 (MQ=255)
                                            gatacggtctttgtcggagatgtcggcgatggtcttcacgttggggttgctgctgaccaggtagtacgggaagttgcccagcgaagccacggccttcacgttctGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCAc                                                                                                          <  7:75810‑M1/44‑1 (MQ=255)
                                             gaAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCAcc                                                                                                         >  4:107388/1‑148 (MQ=255)
                                             atacggtctttgtcggagatgtcggcgatggtcttcacgttggggttgctgctgaccaggtagtacgggaagttgcccagcgaagccacggccttcacgttctGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCAcc                                                                                                         <  6:177587‑M1/45‑1 (MQ=255)
                                                acacGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAgg                                                                                                     <  1:143915/149‑1 (MQ=255)
                                                acacGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAgg                                                                                                     >  3:241464/1‑149 (MQ=255)
                                                acacGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAgg                                                                                                     >  7:166184/1‑149 (MQ=255)
                                                  acGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGc                                                                                                   >  3:119273/1‑149 (MQ=255)
                                                    ggCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCg                                                                                                 <  3:107388/149‑1 (MQ=255)
                                                      cAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCgg                                                                                                >  6:32072/1‑148 (MQ=255)
                                                      cAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGc                                                                                               <  2:88649/149‑1 (MQ=255)
                                                       aaGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGcc                                                                                                  >  3:9483/1‑145 (MQ=255)
                                                       aaGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGcc                                                                                                  <  4:9483/145‑1 (MQ=255)
                                                       aaGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCa                                                                                              <  4:119273/149‑1 (MQ=255)
                                                        gtcggagatgtcggcgatggtcttcacgttggggttgctgctgaccaggtagtacgggaagttgcccagcgaagccacggccttcacgttctGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCa                                                                                              >  5:177587‑M1/93‑148 (MQ=255)
                                                           ggagatgtcggcgatggtcttcacgttggggttgctgctgaccaggtagtacgggaagttgcccagcgaagccacggccttcacgttctGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAAc                                                                                          >  8:75810‑M1/90‑149 (MQ=255)
                                                           aGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAAc                                                                                          <  4:122854/149‑1 (MQ=255)
                                                               gggCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGAACGTCTGGGACCGCACCAAGGGCCGGCAGAACGTg                                                                                       >  8:148515/1‑148 (MQ=255)
                                                               gggCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGCACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTg                                                                                       >  4:31195/1‑148 (MQ=255)
                                                                ggCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCAGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGaa                                                                                     <  4:108351/149‑1 (MQ=255)
                                                                ggCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCGCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGaa                                                                                     <  3:8176/149‑1 (MQ=255)
                                                                ccaatcgacttcgaTGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGc                                                                                               <  2:61203/136‑1 (MQ=255)
                                                                ccaatcgacttcgaTGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGc                                                                                               >  1:61203/4‑139 (MQ=255)
                                                                ccaatcgacttcgaTGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTg                                                                                       >  6:167455/4‑147 (MQ=255)
                                                                  catcgacatcgaAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAgg                                                                                   <  5:131099/149‑1 (MQ=255)
                                                                   atcgacatcgaAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGGGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGc                                                                                  <  6:318849/149‑1 (MQ=255)
                                                                     cgacatcgaAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTc                                                                                                                                       >  1:11572/1‑94 (MQ=255)
                                                                     cgacatcgaAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTc                                                                                                                                       <  2:11572/94‑1 (MQ=255)
                                                                      gacttcgaTGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGt                                                                               <  5:167455/149‑1 (MQ=255)
                                                                       acatcgaAGACGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCCCCGGCCCCGGTGGCGGACCCCTGTTGCCCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTg                                                                              >  6:257825/1‑149 (MQ=255)
                                                                         atcgaAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGc                                                                            >  5:317010/1‑149 (MQ=255)
                                                                               gTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCt                                                                      >  3:191695/1‑149 (MQ=255)
                                                                                  gATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTggg                                                                   >  2:243901/1‑149 (MQ=255)
                                                                                  gATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGCACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTggg                                                                   >  1:93607/1‑149 (MQ=255)
                                                                                       ggCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACt                                                              >  6:26593/1‑149 (MQ=255)
                                                                                          gcAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTcc                                                           >  2:259030/1‑149 (MQ=255)
                                                                                          gcAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTcc                                                           >  2:146704/1‑149 (MQ=255)
                                                                                                 tCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCt                                                                      <  8:17558/131‑1 (MQ=255)
                                                                                                 tCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCAGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCt                                                                      >  7:17558/1‑131 (MQ=255)
                                                                                                   gggTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTAcc                                                  >  2:5971/1‑149 (MQ=255)
                                                                                                   gggTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCACTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGtactac                                                   >  8:120409/1‑148 (MQ=255)
                                                                                                     gTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTg                                                <  7:256217/149‑1 (MQ=255)
                                                                                                     gTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTg                                                <  5:32072/149‑1 (MQ=255)
                                                                                                     gTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTg                                                <  8:166184/149‑1 (MQ=255)
                                                                                                     gTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGGCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTg                                                <  8:173849/149‑1 (MQ=255)
                                                                                                        gCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTg                                                                              >  2:195058/1‑116 (MQ=255)
                                                                                                        gCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTg                                                                              <  1:195058/116‑1 (MQ=255)
                                                                                                        gCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGt                                              <  2:266652/148‑1 (MQ=255)
                                                                                                        gCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTc                                             <  7:56599/149‑1 (MQ=255)
                                                                                                         cTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTca                                            <  8:131401/149‑1 (MQ=255)
                                                                                                            ggCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCACTGGGCAACTTCCCGTACTACCTGGTcagca                                         <  6:317010/149‑1 (MQ=255)
                                                                                                             gCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGTCCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCt                                                                      >  4:194682/1‑119 (MQ=255)
                                                                                                             gCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGTCCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCt                                                                      <  3:194682/119‑1 (MQ=255)
                                                                                                                           aTTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTg                           >  3:38087/1‑148 (MQ=255)
                                                                                                                           aTTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTg                           >  5:31227/1‑148 (MQ=255)
                                                                                                                           aTTGTTGCCCGGTTCGGTGGACATCACCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTg                           >  5:326801/1‑148 (MQ=255)
                                                                                                                            ttgttgTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGaa                         <  2:21023/149‑1 (MQ=255)
                                                                                                                                      gTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGcc               >  3:281501/1‑149 (MQ=255)
                                                                                                                                         cGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGa             <  5:26593/148‑1 (MQ=255)
                                                                                                                                         cGGTGGACATCGCCGGCGCCGGTGTCGGACCACTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGa             <  7:120409/148‑1 (MQ=255)
                                                                                                                                           gTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGACAt          <  4:241464/149‑1 (MQ=255)
                                                                                                                                            tGGACATCGCCAGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGACAtc         >  3:302006/1‑149 (MQ=255)
                                                                                                                                                  tCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGACATCTCCGa    >  8:145483/1‑148 (MQ=255)
                                                                                                                                                    GCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGACATCTCCGACa  <  2:12041‑M1/148‑1 (MQ=255)
                                                                                                                                                    GCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGACATCTCCGACa  >  3:31195‑M1/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTCAACGATGCATTGTTGTCCGGTTCGGTGGACATCGCCGGCGCCGGTGTCGGACCGCTGTTGACCGTCTGGGACCGCACCAAGGGCCGGCAGAACGTGAAGGCCGTGGCTTCGCTGGGCAACTTCCCGTACTACCTGGTCAGCAGCAACCCCAACGTGAAGACCATCGCCGACATCTCCGACA  >  NC_002947/222274‑222569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.