New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2116591 =	64 (1.240)	4 (0.080)	4/252	NT	5.8%	coding (267/2466 nt)	PP_1884	hypothetical protein
	?	NC_002947	2116623 =	68 (1.360)					coding (299/2466 nt)	PP_1884	hypothetical protein

AATATATACGGCGCTTCAAGACCAGCGCTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGTCTGGAACTGTCCGACGTGCCTG  >  NC_002947/2116443‑2116736                                                                                                                                                      |                                                                                                                                                     aaTATATACGGCGCTTCAAGACCAGCGCTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGt                                                                                                                                                      <  8:293824/149‑1 (MQ=255)    cagcgtcaatgcgccgttgtcagcgacatagccaggcacgtcggacagttccagacgcaggcgcagctctggcccgaccagaggttctatccgatcgatccgctgtgggtaccaatgggcccccacctgcttcagccctacctggtTGc                                                                                                                                                    <  2:151959‑M1/3‑1 (MQ=255)           gcgcTTCAAGACCAGCGCTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGc                                                                                                                                            <  1:290781/149‑1 (MQ=255)           aatgcgccgttgtcagcgacatagccaggcacgtcggacagttccagacgcaggcgcagctctggcccgaccagaggttctatccgatcgatccgctgtgggtaccaatgggcccccacctgcttcagccctacctggtTGCCAGCCTg                                                                                                                                             <  6:176005‑M1/10‑1 (MQ=255)                 cAAGACCAGCGCTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATg                                                                                                                                       <  2:329788/148‑1 (MQ=255)                  aaGACCAGCGCTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGa                                                                                                                                      >  5:116122/1‑148 (MQ=255)                      ccAGCGCTTAACTTGACCCTATCAGCGGTGAGACGGCGCAGGACAATTGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCTGTTGTGATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCTGCCTGCGTATGAAAATa                                                                                                                                 <  2:211881/149‑1 (MQ=255)                       cAGCGCTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGCTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATa                                                                                                                                 >  3:2743/1‑148 (MQ=255)                          cgcTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTcg                                                                                                                             >  4:277994/1‑149 (MQ=255)                                   ggACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAAc                                                                                                                     >  1:256681/1‑148 (MQ=255)                                     aggcacgtcggacagttccagacgcaggcgcagctctggcccgaccagaggttctatccgatcgatccgctgtgggtaccaatgggcccccacctgcttcagccctacctggtTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCa                                                                                                                   >  5:176005‑M1/114‑149 (MQ=255)                                         tATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAg                                                                                                              >  1:98641/1‑149 (MQ=255)                                            cAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CATGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGc                                                                                                           >  1:265220/1‑149 (MQ=255)                                                   gagaCGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGaa                                                                                                       >  1:3892/1‑146 (MQ=255)                                                   gagaCGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGaa                                                                                                       <  2:3892/146‑1 (MQ=255)                                                    agaCGGCGCCGGACAATGGTTACAAGGTTTATATGAAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCTATATCACCGGTTCG‑CGTGACAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAg                                                                                                   >  6:324220/1‑149 (MQ=255)                                                        ggCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTgg                                                                                               <  8:157875/149‑1 (MQ=255)                                                        ggCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTgg                                                                                               >  8:48551/1‑149 (MQ=255)                                                           gcCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTggggg                                                                                            >  2:311547/1‑149 (MQ=255)                                                                    tGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTcggc                                                                                                                           <  8:241493/109‑1 (MQ=255)                                                                    tGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTcggc                                                                                                                           >  7:241493/1‑109 (MQ=255)                                                                     ggTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTgg                                                                                               >  6:138537/1‑136 (MQ=255)                                                                     ggTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTgg                                                                                               <  5:138537/136‑1 (MQ=255)                                                                       ttACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTAcc                                                                              <  4:39490/149‑1 (MQ=255)                                                                         aCAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTg                                                                                                <  8:207254/131‑1 (MQ=255)                                                                         aCAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTg                                                                                                >  7:207254/1‑131 (MQ=255)                                                                         aCAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTgg                                                                                  <  8:236474/143‑1 (MQ=255)                                                                         aCAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTgg                                                                                  >  7:236474/1‑143 (MQ=255)                                                                           gcccgaccagaggttctatccgatcgatccgctgtgggtaccaatgggcccccacctgcttcagccctacctggtTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGt                                                                                                                <  5:242378‑M1/39‑1 (MQ=255)                                                                           gcccgaccagaggttctatccgatcgatccgctgtgggtaccaatgggcccccacctgcttcagccctacctggtTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGt                                                                                                                >  6:242378‑M1/76‑114 (MQ=255)                                                                             ggTTTATATGCAGAACTTTGTTCTGGATAACCCGCTGTTGTCATTCTATAATGCCTATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGTCGGCAACCAGGTAGGGCTGAATCAGGTTGGGGCCC‑‑ATTGGTACCCACAGc                                                                        <  7:48551/149‑1 (MQ=255)                                                                                       cAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGatcg‑atcg                                                             >  7:53399/1‑149 (MQ=255)                                                                                       cAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGatcg‑atcg                                                             <  3:277994/149‑1 (MQ=255)                                                                                        aGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTcggcg                                                                                                                          <  8:183369/90‑1 (MQ=255)                                                                                        aGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTcggcg                                                                                                                          >  7:183369/1‑90 (MQ=255)                                                                                         gAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCgg                                                                      <  4:1558/139‑1 (MQ=255)                                                                                         gAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCgg                                                                      >  3:1558/1‑139 (MQ=255)                                                                                                      gATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTgg                                               <  2:98641/148‑1 (MQ=255)                                                                                                      gATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTg                                                <  5:324220/147‑1 (MQ=255)                                                                                                      gATCAACCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAATATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑AATGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTgga                                              >  2:109877/1‑148 (MQ=255)                                                                                                          aCCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCgg                                           <  1:311547/148‑1 (MQ=255)                                                                                                          aCCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCgg                                           <  8:53399/148‑1 (MQ=255)                                                                                                            ccGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCca                                                                            <  7:270657/114‑1 (MQ=255)                                                                                                            ccGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCca                                                                            >  8:270657/1‑114 (MQ=255)                                                                                                            ccGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGc                                         >  5:264685/1‑148 (MQ=255)                                                                                                                       aTTCGATAATGCCGATATCACCGGTTCGTCGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTgcgc                              >  1:186949/1‑149 (MQ=255)                                                                                                                       aTTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCgg                                           >  2:292600/1‑135 (MQ=255)                                                                                                                       aTTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCgg                                           <  1:292600/135‑1 (MQ=255)                                                                                                                       aTTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGcc                             >  7:155627/1‑149 (MQ=255)                                                                                                                       aTTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGcc                             >  1:151959/1‑149 (MQ=255)                                                                                                                       aTTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑AGCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGcc                             >  8:280783/1‑149 (MQ=255)                                                                                                                       aTTCGATAATGCCGATATCACCGGTTCG‑CGGGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTgcgc                              <  3:246606/148‑1 (MQ=255)                                                                                                                        ttCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCt                            <  6:116122/149‑1 (MQ=255)                                                                                                                        ttCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCt                            >  3:255548/1‑149 (MQ=255)                                                                                                                        ttCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCt                            >  8:198083/1‑149 (MQ=255)                                                                                                                           gATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGc                          <  4:255548/148‑1 (MQ=255)                                                                                                                            aTAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGt                        <  8:155627/149‑1 (MQ=255)                                                                                                                             tAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑At                                                                                     <  8:7490/88‑1 (MQ=255)                                                                                                                             tAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑At                                                                                     >  7:7490/1‑88 (MQ=255)                                                                                                                               aTGCCGATATCACCGGTTCG‑CGTGCCATCCTGCGTATTTAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGTCTg                     <  6:264685/149‑1 (MQ=255)                                                                                                                               aTGCCGATATCACCGGTTCG‑CATGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGTCTg                     <  2:265220/149‑1 (MQ=255)                                                                                                                                tGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGATGCGCCTGCGTCTg                     >  8:293351/1‑148 (MQ=255)                                                                                                                                 gCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGTAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGTCTgg                    >  6:245986/1‑148 (MQ=255)                                                                                                                                  ccGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCgg                                           <  5:222348/124‑1 (MQ=255)                                                                                                                                  ccGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCgg                                           >  6:222348/1‑124 (MQ=255)                                                                                                                                   cGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGTCTGGAAc                 >  3:105582/1‑149 (MQ=255)                                                                                                                                         cACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCT‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTg                                 <  1:86083/127‑1 (MQ=255)                                                                                                                                         cACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTg                                 >  2:86083/1‑127 (MQ=255)                                                                                                                                              gTTCG‑GCTGCCATCCCTCCTATGAAAATACTCGGCGGCAAACATGTACGGCTGAAGCATGGGGGGGGCC‑‑ATTTGTAACCAAATGGGATCGAATCGGATAGAACCTCTGGTCGGGCCAGAGCTgc                                <  1:39874/124‑1 (MQ=255)                                                                                                                                              gTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTgc                                >  2:39874/1‑123 (MQ=255)                                                                                                                                                     gTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCCTGGTTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGTCTGGAACTGTCCGACGTGCCTg  >  1:263306/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     AATATATACGGCGCTTCAAGACCAGCGCTTACCTGGACCCTATCAGCGGTGAGACGGCGCCGGACAATGGTTACAAGGTTTATATGCAGAACTTTGTTCTGGATCACCCGCGGTTGTCATTCGATAATGCCGATATCACCGGTTCG‑CGTGCCAGCCTGCGTATGAAAATACTCGGCGGCAACCAGGTAGGGCTGAAGCAGGTGGGGGCCC‑‑ATTGGTACCCACAGCGGATCG‑ATCGGATAGAACCTCTGGTCGGGCCAGAGCTGCGCCTGCGTCTGGAACTGTCCGACGTGCCTG  >  NC_002947/2116443‑2116736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.