New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2590875 =55 (1.060)3 (0.060) 3/242 NT 5.7% coding (219/426 nt) PP_2268 endodeoxyribonuclease I
?NC_002947 2590910 = 48 (1.000)coding (254/426 nt) PP_2268 endodeoxyribonuclease I

CTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCT  >  NC_002947/2590736‑2591021
                                                                                                                                             |                                                                                                                                                    
cTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCgcag                                                                                                                                            >  8:40261/1‑149 (MQ=255)
 tttCGAAAGTCTGGTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCgcag                                                                                                                                            >  2:263481/1‑148 (MQ=255)
  agggaggcttcattgaccggctcgttaagccaggcatggggaaccaacttgtcggcatactggaagccgttcttgctgcaccaatccgcgtaggtggtggtactgcgtttatttatttttgtttttgagttggagaagaCaaa                                                                                                                                                  >  2:287034‑M1/140‑143 (MQ=255)
  agggaggcttcattgaccggctcgttaagccaggcatggggaaccaacttgtcggcatactggaagccgttcttgctgcaccaatccgcgtaggtggtggtactgcgtttatttatttttgtttttgagttggagaagaCaaa                                                                                                                                                  <  1:287034‑M1/4‑1 (MQ=255)
     gAAAGTCTGGTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCAccc                                                                                                                                       >  8:272733/1‑149 (MQ=255)
          tCTGGTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAAc                                                                                                                                  >  7:17806/1‑149 (MQ=255)
            tGGTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACtt                                                                                                                                >  6:124293/1‑149 (MQ=255)
              gTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTg                                                                                                                               <  1:161561/148‑1 (MQ=255)
              gTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGa                                                                                                                              >  4:90975/1‑149 (MQ=255)
               tAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGAc                                                                                                                             <  7:272733/149‑1 (MQ=255)
                  ttCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTg                                                                                                                          >  3:305509/1‑149 (MQ=255)
                      cTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCtt                                                                                                                     <  5:127428/149‑1 (MQ=255)
                         taCCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTg                                                                                                                   >  2:216071/1‑149 (MQ=255)
                              gACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGACCGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCCGCACCCTGAACTTGACGTGCGCTTTGtcttc                                                                                                              >  4:179170/1‑149 (MQ=255)
                              gACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGtcttc                                                                                                              <  3:90975/149‑1 (MQ=255)
                              gACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGtcttc                                                                                                              <  7:307878/149‑1 (MQ=255)
                               ccaggcatggggaaccaacttgtcggcatactggaagccgttcttgctgcaccaatccgcgtaggtggtggtactgcgtttatttatttttgtttttgagttggagaagaCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGtctt                                                                                                               >  5:91694‑M1/111‑149 (MQ=255)
                               aCCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGAATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGtcttct                                                                                                             <  6:70035/149‑1 (MQ=255)
                                ccTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTtctc                                                                                                            <  7:192584/149‑1 (MQ=255)
                                  tGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCt                                                                                                                                      >  1:184264/1‑121 (MQ=255)
                                  tGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCt                                                                                                                                      <  2:184264/121‑1 (MQ=255)
                                  tGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTcc                                                                                                           >  6:328155/1‑148 (MQ=255)
                                    cGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAAc                                                                                                        <  1:216071/149‑1 (MQ=255)
                                        gggaaccaacttgtcggcatactggaagccgttcttgctgcaccaatccgcgtaggtggtggtactgcgtttatttatttttgtttttgagttggagaagaCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGtc                                                                                                                 <  8:8571‑M1/37‑1 (MQ=255)
                                        gggaaccaacttgtcggcatactggaagccgttcttgctgcaccaatccgcgtaggtggtggtactgcgtttatttatttttgtttttgagttggagaagaCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGtc                                                                                                                 >  7:8571‑M1/102‑138 (MQ=255)
                                         gTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCaa                                                                                                         <  6:301492/143‑1 (MQ=255)
                                         gTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCaa                                                                                                         >  5:301492/1‑143 (MQ=255)
                                           tCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTcaaaaa                                                                                                 >  1:41705/1‑149 (MQ=255)
                                                aGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTcaaaaacaaaa                                                                                            <  7:40261/149‑1 (MQ=255)
                                                    cacCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTcaaaaacaaaa                                                                                            <  7:158812/145‑1 (MQ=255)
                                                    cacCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTcaaaaacaaaa                                                                                            >  8:158812/1‑145 (MQ=255)
                                                     acCCCGGACTTCGCAATATCGAAAGGCATAATTGTCGAAACTAATGGCCGTTTTTTTAACGATGACCGCCAAAATCAAATCCTCCCGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAaaata                                                                                         <  1:263481/149‑1 (MQ=255)
                                                       cccGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAaaataaat                                                                                     >  2:190097/1‑148 (MQ=255)
                                                       cccGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAaaataaat                                                                                     >  3:103991/1‑148 (MQ=255)
                                                       cccGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCAGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAaaataaat                                                                                     >  6:278313/1‑148 (MQ=255)
                                                          ggACTTCGCACTAGCTAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAAc                                                                                 <  1:135374/149‑1 (MQ=255)
                                                              ttCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAaaataaa                                                                                      >  3:94821/1‑140 (MQ=255)
                                                              ttCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAaaataaa                                                                                      <  4:94821/140‑1 (MQ=255)
                                                              ttCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCCTCTCCAACTCAAAAACAAAAATAAATAAACGCAg                                                                             >  5:9328/1‑149 (MQ=255)
                                                                  cACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTacc                                                                         <  4:305509/149‑1 (MQ=255)
                                                                           aCGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCCCCAAAAGAAACTCCT‑‑GGTCAAATCGCAGCACCCTGAACTTGACTTGCGCTTTGACTACTCCAACTCAAAAACAAAAAAAAATAAACGAAGTaccaccaacaac                                                                >  7:253559/1‑144 (MQ=255)
                                                                             ggCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCCTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTAcgc                                                              <  6:9328/149‑1 (MQ=255)
                                                                                    ttGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTgg                                                       <  8:17806/149‑1 (MQ=255)
                                                                                    ttGTCGAAACTAAGGGCCGTTTGTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGATTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTgg                                                       >  7:50454/1‑149 (MQ=255)
                                                                                       tCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCATAAGCGCAGCACCCTGAACTAGACGTGCGATTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACAACCACCTACGCGGATTGGTg                                                     >  1:251954/1‑149 (MQ=255)
                                                                                                 gggCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACg                                          <  1:190097/149‑1 (MQ=255)
                                                                                                  ggCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACgg                                         >  2:58598/1‑149 (MQ=255)
                                                                                                    ccGTTTTTTGACCGAGTACCGCCAAAAGCAAATCCT‑‑GGTCAAAGCGCAGCACCCTTAACTTGACGTGCGCTTTGGCTTCTCAAACTAAAAAAAAAAAATAAATAGAAGCAGTACCACAAACTAATCGGATTCGTGCATCTAGAActtc                                        >  2:216965/1‑145 (MQ=255)
                                                                                                      gTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTc                                     <  5:328155/149‑1 (MQ=255)
                                                                                                           ttGACCGACGCCAGCGAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTTAACTTGACGTGCGCTTTGTCTTCTCCACCTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGTCTTCCAGt                                 <  8:253559/148‑1 (MQ=255)
                                                                                                              aCCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGc                             <  4:103991/149‑1 (MQ=255)
                                                                                                                  aGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCAAGTATGCCGa                          >  2:163109/1‑148 (MQ=255)
                                                                                                                    gACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGAAGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACaa                       <  3:179170/149‑1 (MQ=255)
                                                                                                                     aCCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCCACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAg                      >  3:201275/1‑149 (MQ=255)
                                                                                                                       cGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGtt                    <  2:41705/149‑1 (MQ=255)
                                                                                                                         ccAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTc                                     >  2:278230/1‑130 (MQ=255)
                                                                                                                         ccAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTgg                  >  6:50128/1‑149 (MQ=255)
                                                                                                                                 aaCTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCAt          >  6:161162/1‑149 (MQ=255)
                                                                                                                                 aaCTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCAt          <  8:50454/149‑1 (MQ=255)
                                                                                                                                  aCTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATg         <  5:50128/149‑1 (MQ=255)
                                                                                                                                      cT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTg                   >  6:146659/1‑135 (MQ=255)
                                                                                                                                      cT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTg                   <  5:146659/135‑1 (MQ=255)
                                                                                                                                      cT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTg     <  5:124293/149‑1 (MQ=255)
                                                                                                                                           gTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCt  >  4:308700/1‑149 (MQ=255)
                                                                                                                                             CAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAGGATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCTACAAGTTGTTTCACCATGCCTGGCt  <  1:259789‑M1/148‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                    
CTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCTGCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCT‑‑GGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCT  >  NC_002947/2590736‑2591021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.