New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1375310	51 (0.990)	3 (0.060)	3/252	NT	6.3%	coding (930/1911 nt)	kup	potassium transport system protein Kup
	?	NC_002947	= 1375342	40 (0.800)					coding (962/1911 nt)	kup	potassium transport system protein Kup

AATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGTGAACTGGACGCTGATGGTGGGCGTGGTGTTGCTGGTCATCG  >  NC_002947/1375194‑1375488                                                                                                                                                     |                                                                                                                                                   aaTTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGGAATCCGTTGTATCTGCTGGAGCCGGGCTGGGCGCTTCTGCCGTTGGTCGGGCTGGCCACCAGGGCCACGGTTATCGCCACGCAGGCGGTGATGACCgg                                                                                                                                                    >  7:148542/1‑149 (MQ=255) aaTTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCgg                                                                                                                                                    >  7:20978/1‑149 (MQ=255) aaTTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCgg                                                                                                                                                    <  6:96053/149‑1 (MQ=255)  tttAGTTCGGCCAGGGTGGATTGCTGCTGCAAATCCCGGAGGCCGCGCTCAATCCGTTCTATCTGCTGGCGCCGGGATGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCgg                                                                                                                                                    <  4:40065/147‑1 (MQ=255)       ttCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCtt                                                                                                                                              >  4:176089/1‑149 (MQ=255)               gggTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGa                                                                                                                                      <  8:234740/149‑1 (MQ=255)                    cATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGc                                                                                                                                 <  6:250348/149‑1 (MQ=255)                     aTTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGc                                                                                                                                 >  2:157114/1‑148 (MQ=255)                      ttGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGc                                                                                                                                 >  4:142247/1‑147 (MQ=255)                           gctgcAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCa                                                                                                                          >  7:126840/1‑149 (MQ=255)                               cAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCACAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATcc                                                                                                                       <  5:331549/148‑1 (MQ=255)                                  aaCCCTGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCAGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCt                                                                                                                   <  8:278895/149‑1 (MQ=255)                                     ccGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTggg                                                                                                                >  8:99345/1‑149 (MQ=255)                                             cgcgctCACTCCGTTCTATCTGCTCGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCCTGGCCTCGGTTCTCGCCGCGCTGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTc                                                                                                        <  8:148542/149‑1 (MQ=255)                                              gcgcgcAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTcc                                                                                                       >  6:337121/1‑149 (MQ=255)                                                gcgcAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCcgc                                                                                                     <  7:52726/149‑1 (MQ=255)                                                      tCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGc                                                                                               <  1:157114/149‑1 (MQ=255)                                                         gTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATg                                                                                                >  7:197149/1‑145 (MQ=255)                                                               tCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAg                                                                                       <  7:99345/148‑1 (MQ=255)                                                               tCTGCTGGCGCCGGGCTGGGCGCGGCGGCCGTTGGTCGGTCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTc                                                                                         <  8:269857/146‑1 (MQ=255)                                                                ctgctgGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCcgc                                                                                                     >  5:231754/1‑133 (MQ=255)                                                                ctgctgGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCcgc                                                                                                     <  6:231754/133‑1 (MQ=255)                                                                   ctgGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGc                                                                                      <  3:176089/145‑1 (MQ=255)                                                                    tgGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACAcc                                                                                 >  2:56670/1‑149 (MQ=255)                                                                        gcCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGCCCCGCCAGGCCCTCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTc                                                                               >  3:12222/1‑147 (MQ=255)                                                                        gcCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGCCCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGGAGATTCAGCACACCTCag                                                                             >  6:253909/1‑148 (MQ=255)                                                                        gcCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCaa                                                                             <  8:20978/149‑1 (MQ=255)                                                                         ccGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCacac                                                                                  >  6:39200/1‑143 (MQ=255)                                                                         ccGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCacac                                                                                  <  5:39200/143‑1 (MQ=255)                                                                               tGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGcgac                                                                        >  6:270236/1‑147 (MQ=255)                                                                                       gctgcCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCacac                                                                                  <  7:91800/129‑1 (MQ=255)                                                                                       gctgcCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCacac                                                                                  >  8:91800/1‑129 (MQ=255)                                                                                        ctgcCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAgggg                                                               <  8:197149/147‑1 (MQ=255)                                                                                        ctgcCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAgggg                                                               >  7:187796/1‑147 (MQ=255)                                                                                        ctgcCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGc                                                              <  8:126840/148‑1 (MQ=255)                                                                                             gTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGc                                                                                               <  8:293136/110‑1 (MQ=255)                                                                                                        tGGACACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATAATCCGCGCATGCAGATTCAGCACACATCAAGCGACGAGCAGGGGCAGATCTACATTGTTGCg                                             >  4:182464/1‑149 (MQ=255)                                                                                                              ccaTGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGTGAAc                                       <  7:116091/149‑1 (MQ=255)                                                                                                                aTGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGggccatggtggccagcccgaccaacggcagcagcgcccagcccggcgccagcagatagaacggattgcgcgcggcctccgggttttgcagcagcaatgcaccctggccg                                       <  3:228595‑M2/147‑110 (MQ=255)                                                                                                                 tGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGggccatggtggccagcccgaccaacggcagcagcgcccagcccggcgccagcagatagaacggattgcgcgcggcctccgggttttgcagcagcaatgcaccctggccgaag                                    <  1:312100‑M2/149‑113 (MQ=255)                                                                                                                   gCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGggccatggtggccagcccgaccaacggcagcagcgcccagcccggcgccagcagatagaacggattgcgcgcggcctccgggttttgcagcagcaatgcaccctggccgaagt                                   <  2:12157‑M2/148‑114 (MQ=255)                                                                                                                   gCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGTGAACTGGAc                                  >  5:89347/1‑149 (MQ=255)                                                                                                                     cACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGTGAACTGGACGc                                <  6:89347/149‑1 (MQ=255)                                                                                                                        ggTTTTCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCAACCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGGGAACTGGAAGCTGa                             >  2:291369/1‑149 (MQ=255)                                                                                                                                    gCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGcgac                                                                        <  3:228672/94‑1 (MQ=255)                                                                                                                                    gCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGcgac                                                                        >  4:228672/1‑94 (MQ=255)                                                                                                                                      aGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCTAGCGACGAGCAGGGGCAGATCTACTTTGGTGCGGTGAACTGGACGCTGATGGTGGGCgtggtg               <  5:337121/149‑1 (MQ=255)                                                                                                                                        gCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGTGAACTGGACGCTGATGGTGGGCGTGGTGtt             >  1:266414/1‑149 (MQ=255)                                                                                                                                                 tCCGGggccatggtggccagcccgaccaacggcagcagcgcccagcccggcgccagcagatagaacggattgcgcgcggcctccgggttttgcagcagcaatgcaccctggccgaagtaattgagcaccagcgccgggagcaccagga     >  1:12157‑M2/1‑5 (MQ=255)                                                                                                                                                  ccGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGTGAACTGGACGCTGATGGTGGGCGTGGTGTTGCTGGTCAt    <  5:27648/148‑1 (MQ=255)                                                                                                                                                   cGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTAGATTGGTGCGGTGAACTGGACGCTGATGGTGGGCGTGGTGTTGCTGGTCATCg  <  5:270236/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   AATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCACGGTTATCGCCTCGCAGGCGGTGATTTCCGGGGCCTTCTCCCTGACCCGCCAGGCCATCCAGCTGGGCTATATTCCGCGCATGCAGATTCAGCACACCTCAAGCGACGAGCAGGGGCAGATCTACATTGGTGCGGTGAACTGGACGCTGATGGTGGGCGTGGTGTTGCTGGTCATCG  >  NC_002947/1375194‑1375488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.