New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2089797	42 (0.810)	5 (0.100)	4/244	NT	10.3%	coding (230/756 nt)	PP_1867	hypothetical protein
	?	NC_002947	= 2089811	48 (0.990)					coding (244/756 nt)	PP_1867	hypothetical protein

GCAAAGCTGCGTGTTCACCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGATGCCCTGGAGCT  >  NC_002947/2089681‑2089953                                                                                                                                   |                                                                                                                                               gCAAAGCTGCGTGTTCACCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGACATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGt                                                                                                                              >  5:185959/1‑149 (MQ=255)       cTGCGTGTTCACCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGAc                                                                                                                                               >  8:13917‑M2/1‑125 (MQ=255)       cTGCGTGTTCACCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGc                                                                                                                        <  2:322111/149‑1 (MQ=255)        tGCGTGTTCACCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAg                                                                                                                               >  7:188166/1‑141 (MQ=255)        tGCGTGTTCACCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAg                                                                                                                               <  8:188166/141‑1 (MQ=255)                 aCCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGa                                                                                                              >  1:305737/1‑149 (MQ=255)                      cgACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATc                                                                                                          >  6:214965/1‑148 (MQ=255)                        aCCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAg                                                                                                       >  7:229730/1‑149 (MQ=255)                        aCCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAg                                                                                                       <  5:84952/149‑1 (MQ=255)                              gctggctgGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGGGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCGGCTGGAAGTCATCGTGGCCATc                                                                                                 <  4:87450/149‑1 (MQ=255)                              gctggctgGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATc                                                                                                 <  5:244574/149‑1 (MQ=255)                                      gAGTACGACTACACCCGCGCCATGCTGTTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTgcg                                                                                         >  1:8720/1‑149 (MQ=255)                                      gAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTgcg                                                                                         >  1:159132/1‑149 (MQ=255)                                        gTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGcc                                                                                       >  6:243071/1‑149 (MQ=255)                                            gACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGc                                                                                                                        >  8:200659/1‑112 (MQ=255)                                            gACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGc                                                                                                                        <  7:200659/112‑1 (MQ=255)                                             aCTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGAt                                                                                  <  2:159132/149‑1 (MQ=255)                                                 cacCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGc                                                                              <  5:214965/149‑1 (MQ=255)                                                  acCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATAGAGGCCATCGAGCTGCGCCCGGATGTGcc                                                                             >  5:38272/1‑149 (MQ=255)                                                    ccGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCAt                                                                                                                                   <  3:131606/93‑1 (MQ=255)                                                    ccGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCAt                                                                                                                                   >  4:131606/1‑93 (MQ=255)                                                    ccGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTGCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCcgc                                                                           <  8:229730/149‑1 (MQ=255)                                                    ccGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGcc                                                                             >  4:209587/1‑147 (MQ=255)                                                    ccGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCcgc                                                                           <  2:206790/149‑1 (MQ=255)                                                     cgcgCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCcgcg                                                                          >  4:16296/1‑149 (MQ=255)                                                      gcgcCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCgcgc                                                                         <  5:243071/149‑1 (MQ=255)                                                                 gTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGa                                                              >  1:322398/1‑149 (MQ=255)                                                                 gTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGa                                                              >  4:55046/1‑149 (MQ=255)                                                                 gTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGa                                                              <  3:16296/149‑1 (MQ=255)                                                                         gcTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTgg                                                      <  3:55046/149‑1 (MQ=255)                                                                              gCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTg                                                 >  7:22855/1‑149 (MQ=255)                                                                                 aCGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGgac                                              >  5:110406/1‑149 (MQ=255)                                                                                          cGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTgg                                                      >  5:171273/1‑132 (MQ=255)                                                                                          cGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTgg                                                      <  6:171273/132‑1 (MQ=255)                                                                                           ggAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCcgc                                    <  4:117426/149‑1 (MQ=255)                                                                                            gagaGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCcgcg                                   <  1:97950/149‑1 (MQ=255)                                                                                               agCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCt                                <  7:236029/149‑1 (MQ=255)                                                                                                     cTGTTTCTGGGCCTGGGCGCCGGCACGCTGAcccaggcccagaaacagtgcgctctccggcgattcgtggcacagcgcccctaccagcatggcgcgggtgtagtcgtactccagccagctggggtcggcggtgaacacgcagctttgct                          <  2:173410‑M2/149‑119 (MQ=255)                                                                                                      tGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTAtgtg                         >  7:7644/1‑149 (MQ=255)                                                                                                        tttCTGGTCCTCGGCGCCGGGACTCTGACCCAGTCCTGCCTGACGTTCCTGCCGCTGGAAGCCCTCGAGGGCATAGAGCTGCGCCCGGATGTTCCTCTCCTGGCCATGGATTACTTGGGCCTTGACGACGACCCTCGTCTGTATGTgc                        <  4:17706/148‑1 (MQ=255)                                                                                                        tttCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTAtgtg                         <  2:8720/147‑1 (MQ=255)                                                                                                            tgggcctgggcGCCGGCACGCTGAcccaggcccagaaacagtgcgctctccggcgattcgtggcacagcgcccctaccagcatggcgcgggtgtagtcgtactccagccagctggggtcggcggtgaacacgcagctttgctcgatcg                    <  3:306954‑M2/148‑125 (MQ=255)                                                                                                            tgggcctgggcGCCGGCACGCTGAcccaggcccagaaacagtgcgctctccggcgattcgtggcacagcgcccctaccagcatggcgcgggtgtagtcgtactccagccagctggggtcggcggtgaacacgcagctttgctcgatcg                    <  3:91853‑M2/148‑125 (MQ=255)                                                                                                             gggcctgggcGCCGGCACGCTGAcccaggcccagaaacagtgcgctctccggcgattcgtggcacagcgcccctaccagcatggcgcgggtgtagtcgtact                                                                 <  3:209727‑M2/102‑80 (MQ=255)                                                                                                             gggcctgggcGCCGGCACGCTGAcccaggcccagaaacagtgcgctctccggcgattcgtggcacagcgcccctaccagcatggcgcgggtgtagtcgtact                                                                 >  4:209727‑M2/1‑23 (MQ=255)                                                                                                              ggcctgggcGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCgg                 <  8:7644/149‑1 (MQ=255)                                                                                                                 ctgggcGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGa              <  6:185959/149‑1 (MQ=255)                                                                                                                        ccGGCACGCTGACCCAGGCCTGGATGAAGTTACTTCCGCTGGAAGACATCGAGGCCATCGATCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGATGCCCTg       <  6:38272/149‑1 (MQ=255)                                                                                                                        ccGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACTTCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGGGCATCGGCGATGCCCTg       <  4:273859/149‑1 (MQ=255)                                                                                                                        ccGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGATGCCCTg       <  3:209587/149‑1 (MQ=255)                                                                                                                           gCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTg                               >  2:296844/1‑122 (MQ=255)                                                                                                                           gCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTg                               <  1:296844/122‑1 (MQ=255)                                                                                                                           gCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGATGCCCTGGAg    <  2:322398/149‑1 (MQ=255)                                                                                                                             aCGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACTCGCGGCTGTATGTGCGCATCGGCGATGCCCt        <  1:33896/143‑1 (MQ=255)                                                                                                                             aCGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGATGCCCt        >  2:33896/1‑143 (MQ=255)                                                                                                                             aCGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGATGCCCTGGAgct  >  4:94120/1‑149 (MQ=255)                                                                                                                                   |                                                                                                                                               GCAAAGCTGCGTGTTCACCGCCGACCCCAGCTGGCTGGAGTACGACTACACCCGCGCCATGCTGGTAGGGGCGCTGTGCCACGAATCGCCGGAGAGCGCACTGTTTCTGGGCCTGGGCGCCGGCACGCTGACCCAGGCCTGCATGAAGTTCCTGCCGCTGGAAGACATCGAGGCCATCGAGCTGCGCCCGGATGTGCCGCGCCTGGCCATGGATTACTTGGGCCTGGACGACGACCCGCGGCTGTATGTGCGCATCGGCGATGCCCTGGAGCT  >  NC_002947/2089681‑2089953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.