New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4731657	51 (0.990)	3 (0.060)	3/244	NT	6.0%	coding (1104/1224 nt)	sucB	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
	?	NC_002947	= 4731698	47 (0.970)					coding (1063/1224 nt)	sucB	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit

AGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGATGGACAGTTTGCCGTCACGGGC  >  NC_002947/4731553‑4731839                                                                                                                                                  |                                                                                                                                              aGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGgat                                                                                                                                            >  7:234869‑M2/1‑146 (MQ=255)   gCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGgatga                                                                                                                                          >  3:181998‑M2/1‑144 (MQ=255)     gggACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGgatgatg                                                                                                                                        >  6:249607‑M2/1‑142 (MQ=255)     gggACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGgatgatg                                                                                                                                        >  1:97060‑M2/1‑142 (MQ=255)       gACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATAACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGAtgtt                                                                                                                                      <  5:218891/149‑1 (MQ=255)        aCGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGAtgttg                                                                                                                                     >  8:121480/1‑149 (MQ=255)            aTCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCa                                                                                                                                 >  2:111146/1‑149 (MQ=255)                  cagcagGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGTCATCGGGCGCTGGATGATGTTGTGCATGcc                                                                                                                             >  3:232879/1‑147 (MQ=255)                             tGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGcc                                                                                                                >  2:155155/1‑149 (MQ=255)                                   tGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTgcggc                                                                                                          >  7:272323/1‑149 (MQ=255)                                     aCCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGcggcgg                                                                                                        <  4:199734/149‑1 (MQ=255)                                      ccAGGATGGTTACCGCTTCCTTGCCGTCGATCAGGGGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCggg                                                                                                       <  7:185908/149‑1 (MQ=255)                                      ccAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGTCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCggg                                                                                                       <  4:232879/149‑1 (MQ=255)                                       cAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGt                                                                                                      >  7:208423/1‑149 (MQ=255)                                           aaGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGAc                                                                                                  <  1:23879/149‑1 (MQ=255)                                             ggTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATAATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGa                                                                                                >  2:273025/1‑149 (MQ=255)                                                  ccGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCgg                                                                                            <  7:121480/148‑1 (MQ=255)                                                   cGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAAGTTCATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCgggg                                                                                          <  1:111146/149‑1 (MQ=255)                                                    gCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGt                                                                                         <  5:69789/149‑1 (MQ=255)                                                    gCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGt                                                                                         >  2:305608/1‑149 (MQ=255)                                                         cTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGAc                                                                                     <  8:272323/148‑1 (MQ=255)                                                            gCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCgag                                                                                                                          >  2:286414/1‑108 (MQ=255)                                                            gCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCgag                                                                                                                          <  1:286414/108‑1 (MQ=255)                                                              cGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACatcatc                                                                               <  1:305608/149‑1 (MQ=255)                                                                         cGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGt                                                                    <  2:6098/149‑1 (MQ=255)                                                                         cGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGt                                                                    <  6:249390/149‑1 (MQ=255)                                                                                 gTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGt                                                            <  6:313454/149‑1 (MQ=255)                                                                                  tACGACAGCGCCAGGTACATCATCGGGCGAATCACAACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGtt                                                           >  6:306172/1‑149 (MQ=255)                                                                                     gACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtggt                                                        >  2:289917/1‑149 (MQ=255)                                                                                      aCAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtggt                                                        >  5:149028/1‑148 (MQ=255)                                                                                       cAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtggtga                                                      <  5:196817/149‑1 (MQ=255)                                                                                         gcgcCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtggtgatg                                                    <  8:208423/149‑1 (MQ=255)                                                                                         gcgcCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtggtgatg                                                    <  6:149028/149‑1 (MQ=255)                                                                                         gcgcCAGGTACATCATCGGGCGAATCACGACCTGGCCATTCATGGCCATCGGGCGCTGGATGATGTTGTGCATGCAGAGCATGGCGGCCTGCGGCTGGTTGACGATCGGGTTCGACATCATCGAACCGCAGGTGCCACCGTaggagatg                                                    >  7:288082/1‑149 (MQ=255)                                                                                          cgcCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtggtgatgg                                                   >  2:32585/1‑149 (MQ=255)                                                                                           gcCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtggtgatggt                                                  >  8:73426/1‑149 (MQ=255)                                                                                                gTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGgatgatgtacctggcgctgtcgtacgatcaccgcctgatcgacggcaaggaagcggtaaccttcctggtcactatcaagaacctgctggaa                                                    >  5:17025‑M2/1‑51 (MQ=255)                                                                                                gTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGgatgatgtacctggcgctgtcgtacgatcaccgcctgatcgacggcaaggaagcggtaaccttcctggtcactatcaagaacctgctggaa                                                    <  6:17025‑M2/142‑92 (MQ=255)                                                                                                   catcatCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTg                                           <  1:155155/148‑1 (MQ=255)                                                                                                    atcatcGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGc                                          >  1:12332/1‑148 (MQ=255)                                                                                                     tcatcGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCa                                        >  2:281017/1‑149 (MQ=255)                                                                                                        tcGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGgatgatgtacctggcgctgtcgtacgatcaccgcctgatcgacggcaaggaagcggtaaccttcctggtcactatcaagaacctgctggaagatccgtcccgcctg                                     <  3:37510‑M2/149‑107 (MQ=255)                                                                                                         cGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCg                                     <  1:281017/148‑1 (MQ=255)                                                                                                           ggCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGGGATGGTGAAGGTGCCACCGGt                                   >  5:22174/1‑148 (MQ=255)                                                                                                             cGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCAt                                <  7:73426/149‑1 (MQ=255)                                                                                                               aaTCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCAGGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCAtct                              <  8:233976/149‑1 (MQ=255)                                                                                                                    cGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTc                          >  4:216873/1‑148 (MQ=255)                                                                                                                     gACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGa                        >  1:113438/1‑149 (MQ=255)                                                                                                                      aCCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGAt                       <  1:32585/149‑1 (MQ=255)                                                                                                                             cATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtg                                                          <  7:85910/107‑1 (MQ=255)                                                                                                                             cATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTtg                                                          >  8:85910/1‑107 (MQ=255)                                                                                                                              aTTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGATGGACAGtt               <  1:273025/149‑1 (MQ=255)                                                                                                                                 gATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGATGGACAGTTTGc            >  4:116378/1‑149 (MQ=255)                                                                                                                                   tGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGATGGACAGTTTGcc           <  1:289917/148‑1 (MQ=255)                                                                                                                                       cATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGATGGACAGTTTGCCGTCAc      <  5:306172/149‑1 (MQ=255)                                                                                                                                           gggCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGATGGACAGTTTGCCGTCACGGGc  <  2:12332/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                              AGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGTACATCATCGGGCGAATCACGACCTGGCCATTGATGGCCATCGGGCGCTGGATGATGTTGTGCATGCCGAGAATGGCGGCCTGCGGCGGGTTGACGATCGGGGTCGACATCATCGAACCGAAGGTGCCACCGTTGGTGATGGTGAAGGTGCCACCGGTCATCTCTTCGATGGACAGTTTGCCGTCACGGGC  >  NC_002947/4731553‑4731839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.