New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5559119 =	41 (0.790)	3 (0.060)	3/242	NT	8.3%	coding (134/1293 nt)	purA	adenylosuccinate synthetase
	?	NC_002947	5559153 =	28 (0.580)					coding (100/1293 nt)	purA	adenylosuccinate synthetase

CACGCATCAGTGCATCCGGGGCAACGACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCATTCACGCAAACTTGGTTGCCGGCCTGTTGC  >  NC_002947/5559006‑5559296                                                                                                                                                    |                                                                                                                                                cACGCATCAGTGCATCCGGGGCAACGACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTa                                                                                                                                                 <  2:329059/148‑1 (MQ=255) cACGCATCAGTGCATCCGGGGCAACGACCACGCAGTTACCGATCAGGCGCTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTa                                                                                                                                                 <  2:195980/148‑1 (MQ=255)    gaccaatgtaatgggtaagaatgtcgtcgtcctgggcacccagtggggtgatgagggcaaaggcaagatcgtcgatctgctgaccgaacatgctgccgccgtagtgcgctACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAgcgc                                                                                                                                             >  4:180707‑M1/111‑149 (MQ=255)    gCATCAGTGCATCCGGGGCAACGACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAgcgc                                                                                                                                             <  7:67580/149‑1 (MQ=255)                    ggCAACGACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGTATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCTACCCTGGTATCGCACTACGGCAGCAGCAt                                                                                                                             <  1:23863/149‑1 (MQ=255)                    ggCAACGACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCAt                                                                                                                             <  7:237819/149‑1 (MQ=255)                       aaCGACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGtt                                                                                                                          <  3:26313/149‑1 (MQ=255)                          gACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCgg                                                                                                                       >  3:217540/1‑149 (MQ=255)                              aCGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTcag                                                                                                                   <  2:52499/149‑1 (MQ=255)                                         gATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATcgacga                                                                                                        <  2:18656/149‑1 (MQ=255)                                         gATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATcgacga                                                                                                        >  2:71942/1‑149 (MQ=255)                                                 aCTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCt                                                                                                >  1:311041/1‑149 (MQ=255)                                                  cTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCtt                                                                                               >  7:7607/1‑149 (MQ=255)                                                     cACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCttt                                                                                              <  2:311041/147‑1 (MQ=255)                                                     cACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGc                                                                                            >  6:176302/1‑149 (MQ=255)                                                                gCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCAccc                                                                                 >  7:38641/1‑149 (MQ=255)                                                                    gATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACt                                                                             <  6:21235/149‑1 (MQ=255)                                                                        ccGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGt                                                                         <  4:217540/149‑1 (MQ=255)                                                                              ggaATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAg                                                                   >  1:120883/1‑149 (MQ=255)                                                                                aaTCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGga                                                                 >  6:255751/1‑149 (MQ=255)                                                                                 aTCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCAt                                                                                                                             <  3:286403/88‑1 (MQ=255)                                                                                 aTCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCAt                                                                                                                             >  4:286403/1‑88 (MQ=255)                                                                                     ggTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGgacgac                                                             >  3:69864/1‑148 (MQ=255)                                                                                            aaCGGTCTTTTCACAGTTGATCACAAGGGTGTGACCCTCATTGTGGCCACACTGGTAGCGCAATACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATAAACCCACTGTGTGCCCAGGAAGACGACATTc                                                      >  4:196113/1‑148 (MQ=255)                                                                                                gTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTAcc                                                 <  1:151142/149‑1 (MQ=255)                                                                                                     ttCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTa                                            >  1:314471/1‑149 (MQ=255)                                                                                                        aCCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACAt                                         >  7:35619/1‑149 (MQ=255)                                                                                                        aCCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACAt                                         >  7:264882/1‑149 (MQ=255)                                                                                                             gcgctaccagggtggccacaatgcgggtcacaccctggtAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTc                                    >  4:180707‑M2/40‑149 (MQ=255)                                                                                                               aTCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCt                                  <  2:4393/149‑1 (MQ=255)                                                                                                                  ACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCa                                >  8:264882‑M1/1‑148 (MQ=255)                                                                                                                   ccagggtggccacaatgcgggtcacaccctggtAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGgacgacg                                                            <  2:57536‑M2/86‑1 (MQ=255)                                                                                                                   ccagggtggccacaatgcgggtcacaccctggtAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGgacgacg                                                            >  1:57536‑M2/34‑119 (MQ=255)                                                                                                                               ccGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTAc                                                  <  4:143117/117‑1 (MQ=255)                                                                                                                               ccGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTAc                                                  >  3:143117/1‑117 (MQ=255)                                                                                                                                 gCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCATTCACGCAAACTTGGt                <  8:35619/149‑1 (MQ=255)                                                                                                                                       tgGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCATTCACGCAAACTTGGTTGCCgg          <  2:314471/149‑1 (MQ=255)                                                                                                                                         gCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCATTCACGCAAACTTGGTTGCCGGc         <  5:255751/148‑1 (MQ=255)                                                                                                                                              cctggtAGCGCACTACGGCGGCAGCATGTTCGGTCAGCGGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCATTCACGCAAACTTGGTTGCCGGCCTGTTg   >  4:212943‑M2/7‑149 (MQ=255)                                                                                                                                               ctggtAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCATTCACGCAAACTTGGTTGCCGGCCTGTTGc  <  3:196113‑M2/144‑1 (MQ=255)                                                                                                                                                  gtAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTAccc                                                <  6:189600‑M2/98‑1 (MQ=255)                                                                                                                                                  gtAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTAccc                                                >  5:189600‑M2/3‑100 (MQ=255)                                                                                                                                                    |                                                                                                                                                CACGCATCAGTGCATCCGGGGCAACGACCACGCCGTTACCGATCAGGCACTGCACGCCTTCACGCAGGATGCCGGACGGAATCAGGTGCAGAACGGTCTTTTCACCGTTGATCACCAGGGTGTGACCCGCATTGTGGCCACCCTGGTAGCGCACTACGGCGGCAGCATGTTCGGTCAGCAGATCGACGATCTTGCCTTTGCCCTCATCACCCCACTGGGTGCCCAGGACGACGACATTCTTACCCATTACATTGGTCCTCATTCACGCAAACTTGGTTGCCGGCCTGTTGC  >  NC_002947/5559006‑5559296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.