Predicted mutation
evidence seq id position mutation freq annotation gene description
JC NC_002947 5,681,415 +CGGG 100% intergenic (‑133/+71) PP_4986 ← / ← PP_4987 hemolysin III family channel protein/putative Chemotaxis protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 56814150 (0.000)26 (0.520)
+CGGG
25/252 NT 100% intergenic (‑133/+71) PP_4986/PP_4987 hemolysin III family channel protein/putative Chemotaxis protein
?NC_002947 5681416 = 0 (0.000)intergenic (‑134/+70) PP_4986/PP_4987 hemolysin III family channel protein/putative Chemotaxis protein

TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG  >  NC_002947/5681268‑5681563
                                                                                                                                                    |                                                                                                                                                   
ccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggg                                                                                                                                                     <  1:2023‑M2/1‑1 (MQ=255)
         atgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTgcgc                                                                                                                                            >  4:292483‑M2/140‑149 (MQ=255)
           gcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTgcg                                                                                                                                             >  7:51010‑M2/138‑146 (MQ=255)
           gcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa                                                                                                                                           <  8:51010‑M2/11‑1 (MQ=255)
           gcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAg                                                                                                                                          >  5:234048‑M2/138‑149 (MQ=255)
            caaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGc                                                                                                                                         <  6:23070‑M2/13‑1 (MQ=255)
                 acagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggg                                                                                                                                                     >  1:181011‑M2/132‑132 (MQ=255)
                 acagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggg                                                                                                                                                     <  2:181011‑M2/1‑1 (MQ=255)
                  cagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATc                                                                                                                                   <  3:292483‑M2/19‑1 (MQ=255)
                                 gggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGac                                                                                                                              >  6:280169‑M2/116‑139 (MQ=255)
                                 gggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGac                                                                                                                              <  5:280169‑M2/24‑1 (MQ=255)
                                  ggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCt                                                                                                                   <  6:234048‑M2/35‑1 (MQ=255)
                                   gcggggttcctgttgtgttgctgaggggttcgttcttggggggagcggccttgtgtcgctaaaggggcgcgaagcggccccaggctttcattgccactccatcaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTc                                                                                                                  <  8:294020‑M2/36‑1 (MQ=255)
                                       ggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgacgggGCTGCTGCGCAGCCCTATAGCGCCACAAGGCCTCTACCa                                                                                                               >  5:240774‑M2/110‑148 (MQ=255)
                                            cttttgtgatgctgatgtcttcgttctttgtcggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggatttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCTCTCCCACTCCa                                                                                                          <  6:240774‑M2/44‑1 (MQ=255)
                                                         gatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccaatgcattaaacggcgggGCTGCTGCGCAGGCCTATCGCGACACAAGTCCGCTCCCACTCCAGACCACCAGGCCCt                                                                                            >  7:75724‑M2/92‑149 (MQ=255)
                                                                                  gccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGt                                                                     >  7:243015‑M2/67‑147 (MQ=255)
                                                                                               aaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGAccacca                                                                                                  <  5:22854‑M2/52‑1 (MQ=255)
                                                                                                 aggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg                                                                 <  5:70497‑M2/85‑1 (MQ=255)
                                                                                                 aggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg                                                                 >  6:70497‑M2/52‑136 (MQ=255)
                                                                                                  ggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCGCTCCCACTCCAGACCACCCGGCCCTGCGCCTCACCTCCTAACCAAGGTCAGGTTGCAGATCCGCGt                                                   >  6:78447‑M2/51‑149 (MQ=255)
                                                                                                                ccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCtt                                     >  4:153842‑M2/37‑149 (MQ=255)
                                                                                                                    aggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc                                  >  1:217147‑M2/33‑148 (MQ=255)
                                                                                                                     ggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCaa                                <  3:153842‑M2/118‑1 (MQ=255)
                                                                                                                      gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAAt                               <  8:243015‑M2/119‑1 (MQ=255)
                                                                                                                          tcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGa                           >  3:125207‑M2/27‑149 (MQ=255)
                                                                                                                            attgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAc                          >  3:206095‑M2/25‑148 (MQ=255)
                                                                                                                                 cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCCCGCACCAGCCGTTCCAATGCGACCCGGTc                    >  7:284658‑M2/20‑149 (MQ=255)
                                                                                                                                        tgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGGTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAcc             <  4:206095‑M2/137‑1 (MQ=255)
                                                                                                                                               ccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACAAGGCCCTGCGCCACACATCCTAAACAAGGTCAGGATGCAGATCCGCGTCACGCACCAGCCTTTCCAATTCGACCACGTCACGTACCCCCGCCa      >  2:263273‑M2/6‑149 (MQ=255)
                                                                                                                                                   gGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTg  <  4:125207‑M2/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG  >  NC_002947/5681268‑5681563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.