| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,359,064 | T→A | 5.0% | E402D (GAA→GAT) | nusA ← | transcription termination/antitermination factor L |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,359,064 | 0 | T | A | 5.0% | 248.9 / 2.3 | 79 | E402D (GAA→GAT) | nusA | transcription termination/antitermination factor L |
| Reads supporting (aligned to +/- strand): ref base T (35/40); new base A (2/2); total (37/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.08e-01 | |||||||||||
CAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGTTT > NC_002947/5358920‑5359212 | cAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGt < 5:277065/149‑1 (MQ=255) aGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGGGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTc < 6:117165/149‑1 (MQ=255) gTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTc > 7:134357/1‑148 (MQ=255) cAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaat < 8:134357/148‑2 (MQ=255) ccgccAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCa < 7:198165/149‑1 (MQ=255) gccAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTGTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCAt > 1:99236/1‑149 (MQ=255) ccAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATc > 4:186552/1‑148 (MQ=255) gTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGt > 5:252181/1‑149 (MQ=255) tCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGtt < 1:42552/149‑1 (MQ=255) tCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGtt < 6:252181/149‑1 (MQ=255) tNTCCATGCNNTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTg < 8:19128/146‑1 (MQ=255) tGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGa < 8:92967/147‑1 (MQ=255) cATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCAttt < 7:231471/149‑1 (MQ=255) cATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCAtt > 8:231471/1‑148 (MQ=255) cTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATttcttc > 2:305939/1‑147 (MQ=255) cTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATttcttc < 1:305939/147‑1 (MQ=255) cTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTcc > 3:257908/1‑148 (MQ=255) cTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCAATCGATGTTGAGCATTTCTTcc > 6:187158/1‑148 (MQ=255) cTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGACATCGATGTTGAGCATTTCTTcc > 8:95260/1‑148 (MQ=255) ggAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa > 2:290069/1‑117 (MQ=255) ggAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa < 1:290069/117‑1 (MQ=255) ggAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTa < 3:186552/149‑1 (MQ=255) gagCTGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGt < 7:32422/149‑1 (MQ=255) gCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGtt < 5:95473/148‑2 (MQ=255) ggTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGc > 4:152899/1‑148 (MQ=255) gTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGt < 5:309132/139‑1 (MQ=255) gTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGt > 6:309132/1‑139 (MQ=255) gTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCaa > 5:185249/1‑149 (MQ=255) cGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATttc < 4:204030/148‑1 (MQ=255) gCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGTTGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATttctt > 1:220259/1‑148 (MQ=255) cGGGTGGTCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCaa < 4:257908/149‑1 (MQ=255) cGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCaa < 4:105293/149‑1 (MQ=255) cGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCaa < 6:185249/149‑1 (MQ=255) gggTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAg < 3:152899/149‑1 (MQ=255) gggTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAg < 6:278527/149‑1 (MQ=255) gggTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTAAGTAGGCAATTTCTTCAAg > 8:99525/1‑149 (MQ=255) gTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAA‑GGTACGTAGGAAATTTCTAAAAGTCTtgtg > 2:221794/1‑148 (MQ=255) tCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGaa < 2:99236/149‑1 (MQ=255) ccAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCt > 8:20047/1‑149 (MQ=255) ccAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCt > 1:284697/1‑149 (MQ=255) tcttcGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGa < 2:226887/148‑1 (MQ=255) gTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGa > 6:198874/1‑142 (MQ=255) gTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGa < 5:198874/142‑1 (MQ=255) tAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGCGCTCATTGACGATGTCTTCGTCAAAGCCCTCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACt > 6:46468/1‑149 (MQ=255) tAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACt > 4:27609/1‑149 (MQ=255) cGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTgg < 2:220259/149‑1 (MQ=255) aTGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGATGGTGAAGCCTTCGTCGACC‑AGCACTTGGGc > 7:213306/1‑149 (MQ=255) gCCTTTGTCAACAAACGGTCCTTTGCTCGAGCGCGGATCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTTAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAg < 1:221794/149‑1 (MQ=255) ccTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGAc > 2:134710/1‑133 (MQ=255) ttGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGctc > 1:254018/1‑149 (MQ=255) gTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGctcctc < 2:254018/149‑1 (MQ=255) gTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGctcctc < 3:27609/149‑1 (MQ=255) gTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGctcctc > 2:218740/1‑149 (MQ=255) tCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCtcg > 8:103204/1‑149 (MQ=255) aacaaACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCtcgtc > 5:224006/1‑149 (MQ=255) aacaaACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCtcgtc > 2:95547/1‑149 (MQ=255) aCGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACtt > 4:113258/1‑149 (MQ=255) gTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTc > 5:148242/1‑147 (MQ=255) gTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTc < 6:148242/147‑1 (MQ=255) gCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCATAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCt < 3:52531/148‑1 (MQ=255) gCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCt < 1:218740/148‑1 (MQ=255) gAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGCTGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgt < 4:253045/102‑1 (MQ=255) gAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgt > 3:253045/1‑102 (MQ=255) gAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGa < 7:20047/147‑1 (MQ=255) gAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGAt > 6:297663/1‑148 (MQ=255) gcgaGGATCTCATTGACGATGTCTTCGTCAAAGCCATCGATTTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATg < 8:213306/147‑1 (MQ=255) tggctttGACGAAGACATCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTgcg < 2:198695/143‑1 (MQ=255) tggctttGACGAAGACATCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTgcg > 1:198695/6‑148 (MQ=255) aTTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCt > 6:315811/1‑131 (MQ=255) aTTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGa < 2:284697/149‑1 (MQ=255) ttGAAGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCATGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGAt < 3:37563/149‑1 (MQ=255) aCGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTc < 7:184766/149‑1 (MQ=255) cGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAg > 1:73506/1‑122 (MQ=255) cGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAg < 2:73506/121‑1 (MQ=255) gATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAg > 6:170710/1‑141 (MQ=255) gATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAg < 5:170710/141‑1 (MQ=255) gATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGACAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATTTCAc > 7:257528/1‑149 (MQ=255) aTGTCTTCGTCAAAGCCATCTATGTTTAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCTTGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCAc < 1:95547/149‑1 (MQ=255) aTGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCAcc < 7:95260/149‑1 (MQ=255) ttCGTCAAAGACATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGttt > 6:135157/1‑149 (MQ=255) | CAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGT‑TTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAAC‑GGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACC‑AGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGTTT > NC_002947/5358920‑5359212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |