Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,602,162 T→A 6.5% E440D (GAA→GAT PP_4924 ← subtilase family serine protease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,602,1620TA 6.5% 186.9 / 3.3 61E440D (GAA→GATPP_4924subtilase family serine protease
Reads supporting (aligned to +/- strand):  ref base T (33/24);  new base A (2/2);  total (35/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01

CTGACGCACCTCTCCTACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGC  >  NC_002947/5602018‑5602310
                                                                                                                                                 |                                                                                                                                                    
cTGACGCACCTCTCCTACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCaa                                                                                                                                                  >  2:217952/1‑149 (MQ=255)
     gCACCTCTCCTACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTCAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGtt                                                                                                                                              >  2:148361/1‑148 (MQ=255)
        ccTCTCCTACCGGCTCGACCTGTCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCGATTGCGCCCAGACGGCGTCTTCAACGTtgatg                                                                                                                                          <  8:43387/149‑1 (MQ=255)
              cTACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCATCAACGTTGAAGACGc                                                                                                                                      <  7:226600/147‑1 (MQ=255)
               tACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCAt                                                                                                                                   >  7:184187/1‑149 (MQ=255)
                      tCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGAc                                                                                                                                        >  4:132958/1‑137 (MQ=255)
                        gACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGtt                                                                                                                            <  1:64740/148‑1 (MQ=255)
                        gACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGACATCGGCACGCCCGTAGTGGTTGCCATCGACCCACACATTCAATTGCGCCCAGACGGCGTCTTAAACGTTGATGACGCCAACGGCGTTgg                                                                                                                          >  7:204276/1‑149 (MQ=255)
                           cTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGTCGTTGGCGt                                                                                                                       <  6:28919/149‑1 (MQ=255)
                           cTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCAACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGt                                                                                                                       <  7:148934/149‑1 (MQ=255)
                                cGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGAAGCCATCGCCCTTGGCGTCAac                                                                                                                   >  7:293303/1‑148 (MQ=255)
                                 gAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAacac                                                                                                                 >  4:64746/1‑149 (MQ=255)
                                    cTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTg                                                                                                              >  8:223086/1‑149 (MQ=255)
                                                aaTGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGggcggc                                                                                                    >  2:142837/1‑147 (MQ=255)
                                                aaTGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGggcggc                                                                                                    <  1:142837/147‑1 (MQ=255)
                                                 aTGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGaa                                                                                                 <  1:217952/149‑1 (MQ=255)
                                                  tGCCATGCTCCTGCAATGCCCTCAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAg                                                                                                <  1:148361/149‑1 (MQ=255)
                                                    ccATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCATCAACGTTGAAGACGcc                                                                                                                                     >  6:193636/1‑110 (MQ=255)
                                                    ccATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCATCAACGTTGAAGACGcc                                                                                                                                     <  5:193636/110‑1 (MQ=255)
                                                      aTGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGaa                                                                                                 <  8:230092/144‑1 (MQ=255)
                                                      aTGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCAt                                                                                            >  2:31240/1‑149 (MQ=255)
                                                      aTGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCAGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGaa                                                                                                 >  7:230092/1‑144 (MQ=255)
                                                          tCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCtt                                                                                        >  4:46203/1‑149 (MQ=255)
                                                            cTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTg                                                                                       >  7:10652/1‑148 (MQ=255)
                                                               cAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGaa                                                                                     <  8:89967/147‑1 (MQ=255)
                                                                aaTGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACgg                                                                                  >  3:155377/1‑149 (MQ=255)
                                                                      cTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGttt                                                                             >  3:258297/1‑148 (MQ=255)
                                                                         aGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTg                                                                                                                           <  4:127095/99‑1 (MQ=255)
                                                                         aGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTg                                                                                                                           >  3:127095/1‑99 (MQ=255)
                                                                            tCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCa                                                                        >  1:33938/1‑147 (MQ=255)
                                                                            tCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCa                                                                        >  4:92271/1‑147 (MQ=255)
                                                                            tCACCGGCAGCGGCACGGCCGTCGTGGGTGCGATCGACGCGCCCCTGCAATTGCGCCGAGACGGCGTCTTCAGCGTTGATGACGCGATGGGCGTTGGCGTCAGCAGTGGCCAGGGCGGCGAGGCCATCCTTGAACGGCGTTTCACCa                                                                        >  6:241765/1‑147 (MQ=255)
                                                                                 ggCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGc                                                                 <  7:223086/149‑1 (MQ=255)
                                                                                  gaaTCGGCACGCCCGTCGTGGTTGCCATCGAACCAAACCTTCAATTGCGCCCAGACGTCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTTCCAGGGCGGCGAAGTCATCCTTGATCGTCGTTTCACCAGAGCTGcc                                                                <  8:204276/147‑1 (MQ=255)
                                                                                      cGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCa                                                            >  1:324356/1‑149 (MQ=255)
                                                                                       ggCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCa                                                            <  2:127470/148‑1 (MQ=255)
                                                                                          aCGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCActgc                                                        >  2:65921/1‑149 (MQ=255)
                                                                                              ccGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCActgcctgc                                                    >  5:176853/1‑149 (MQ=255)
                                                                                              ccGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCActgcctgc                                                    >  7:241317/1‑149 (MQ=255)
                                                                                                   gtGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTgc                                               >  3:205410/1‑149 (MQ=255)
                                                                                                          ccATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgta                                        <  4:317157/149‑1 (MQ=255)
                                                                                                          ccATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgta                                        <  3:92271/149‑1 (MQ=255)
                                                                                                           cATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgtag                                       >  4:260681/1‑149 (MQ=255)
                                                                                                            aTCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgtag                                       >  7:19131/1‑148 (MQ=255)
                                                                                                             tCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCt                                                                   <  8:71611/119‑1 (MQ=255)
                                                                                                             tCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgtagta                                     <  8:293303/149‑1 (MQ=255)
                                                                                                                aCCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTc                                  <  3:46203/149‑1 (MQ=255)
                                                                                                                aCCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTc                                  <  1:65921/149‑1 (MQ=255)
                                                                                                                 cccACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTc                                  <  4:155377/148‑1 (MQ=255)
                                                                                                                 cccACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCg                                 <  8:10652/149‑1 (MQ=255)
                                                                                                                  ccACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAacac                                                                                                                 >  4:118674/1‑68 (MQ=255)
                                                                                                                  ccACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAacac                                                                                                                 <  3:118674/68‑1 (MQ=255)
                                                                                                                    acacCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCg                                 >  7:177566/1‑146 (MQ=255)
                                                                                                                    acacCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGgag                              <  8:241317/149‑1 (MQ=255)
                                                                                                                        cTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGaa                            >  6:224806/1‑147 (MQ=255)
                                                                                                                         ttCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAg                         >  6:316761/1‑149 (MQ=255)
                                                                                                                                   gcCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGAc                >  2:292592/1‑149 (MQ=255)
                                                                                                                                     ccAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGt              >  8:48584/1‑149 (MQ=255)
                                                                                                                                       aGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTg            >  1:35618/1‑149 (MQ=255)
                                                                                                                                            gCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCAc       <  8:184187/149‑1 (MQ=255)
                                                                                                                                             cGTCATCAACGTTGAAGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCCCTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCAcc      >  5:172077/1‑149 (MQ=255)
                                                                                                                                                 ttCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGc  >  5:313873/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CTGACGCACCTCTCCTACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGC  >  NC_002947/5602018‑5602310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: