| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,927,510 | G→A | 6.5% | L129L (CTG→TTG) | PP_5195 ← | iron ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,927,510 | 0 | G | A | 6.5% | 181.8 / 2.0 | 61 | L129L (CTG→TTG) | PP_5195 | iron ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (30/27); new base A (2/2); total (32/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01 | |||||||||||
CAGGGGCGATAACCCAAGTACCCGCGCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTCGACCGGGGAAGTCG > NC_002947/5927364‑5927658 | cAGGGGCGATAACCCAAGTACCCGCGCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGaggcag < 5:329526/147‑1 (MQ=255) aTAACCCAAGTACCCGCGCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGc > 1:47361/1‑149 (MQ=255) tAACCCAAGTACCCGCGCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGcc < 5:9571/149‑1 (MQ=255) ccAAGTACCCGCGCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGac > 8:110342/1‑148 (MQ=255) aaGTACCCGCGCCGCCTCCATCAGGCGCTTGCCCTGAGCCAGGAACGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAaca > 1:176295/1‑149 (MQ=255) cgcgCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGc > 8:220229/1‑135 (MQ=255) cgcgCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGc < 7:220229/135‑1 (MQ=255) ccATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCtt > 6:67190/1‑149 (MQ=255) cATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCttt < 5:284639/149‑1 (MQ=255) aGGCCCTTGCCCTGAGCCAGGAACGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCAc < 2:176295/149‑1 (MQ=255) ggCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCAcc > 1:258355/1‑149 (MQ=255) ccTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGc > 7:229701/1‑148 (MQ=255) tGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCg > 6:12316/1‑144 (MQ=255) tGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCg < 5:12316/144‑1 (MQ=255) gAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAg > 7:271820/1‑149 (MQ=255) cAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCca < 2:187524/149‑1 (MQ=255) aGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGc < 8:271820/149‑1 (MQ=255) cGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCGGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCcga > 3:146475/1‑149 (MQ=255) tGCGCGCCAACAAGTAGACATACGCATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACCCACCCGAGCCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCCCCCAGGGCGCTTTGCACCGGGACGCCAAAGTCCAGCAGGCcgac > 4:254070/1‑148 (MQ=255) gcgcCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCcgacg > 6:179663/1‑146 (MQ=255) gcgcCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCgacgaa < 5:179663/148‑1 (MQ=255) cgcCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCgacgaaga < 3:254070/149‑1 (MQ=255) gcCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCgacgaagac > 4:27418/1‑149 (MQ=255) aacaaGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCgacgaagacgaa > 2:103589/1‑149 (MQ=255) aacaaGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCgacgaagacgaa < 3:309050/149‑1 (MQ=255) aGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGcc < 3:27418/149‑1 (MQ=255) gTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGAGATGGATTGGCCCGAACAGCCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAAc > 1:267464/1‑149 (MQ=255) aGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAg > 8:70130/1‑149 (MQ=255) gATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAg < 6:290371/146‑1 (MQ=255) gATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAg > 5:290371/1‑146 (MQ=255) gATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGcc > 2:224294/1‑149 (MQ=255) aTAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCg > 1:328371/1‑149 (MQ=255) agaagaCCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCgg > 4:209085/1‑148 (MQ=255) gaagaCCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGa < 7:70130/149‑1 (MQ=255) gaagaCCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGa > 3:162188/1‑149 (MQ=255) gaagaCCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGa < 2:47361/149‑1 (MQ=255) gaCCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCGGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg < 4:146475/149‑1 (MQ=255) gaCCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg < 2:92689/149‑1 (MQ=255) cACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACg < 8:229701/149‑1 (MQ=255) cAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACgg > 6:188814/1‑147 (MQ=255) cAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTa < 7:110342/149‑1 (MQ=255) aGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAg < 1:211908/149‑1 (MQ=255) ggACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACg > 2:179750/1‑125 (MQ=255) ggACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACg < 1:179750/125‑1 (MQ=255) gTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATg < 8:182823/132‑1 (MQ=255) gTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATg > 7:182823/1‑132 (MQ=255) aTTACCCCACCGGTGGAACGCACCCGAGGCAAG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg > 2:269261/1‑130 (MQ=255) aTTACCCCACCGGTGGAACGCACCCGAGGCAAG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg < 1:272899/130‑1 (MQ=255) aTTACCCCACCGGTGGAACGCACCCGAGGCAAG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg > 2:272899/1‑130 (MQ=255) aTTACCCCACCGGTGGAACGCACCCGAGGCAAG‑‑‑CCCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg < 1:269261/130‑1 (MQ=255) ccccACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGGCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAg > 7:283408/1‑149 (MQ=255) cccACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGt > 6:1202/1‑149 (MQ=255) ccACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg < 3:275493/124‑1 (MQ=255) ccACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATgg > 4:275493/1‑124 (MQ=255) aCCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTcca < 2:267464/149‑1 (MQ=255) aCCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTc > 2:168547/1‑147 (MQ=255) aCCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTc > 1:69962/1‑147 (MQ=255) tGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTccagccag > 8:167951/1‑149 (MQ=255) gAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTa < 2:302892/124‑1 (MQ=255) aCGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTc < 7:167951/149‑1 (MQ=255) cGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGGCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTCGACCggg < 2:258355/149‑1 (MQ=255) cGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTCGACCggg < 5:188814/149‑1 (MQ=255) ggcagg‑‑‑cGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTCGACCGGGGaa < 1:224294/149‑1 (MQ=255) agg‑‑‑cGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGAAGGCCGGGATGGCGAACGGTACCATCAGCGCCCAGTCAAGCCATCGTCGACCGGGGAAGTc > 6:295780/1‑149 (MQ=255) gg‑‑‑cGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTCGACCGGGGAAGTCg < 1:168547/149‑1 (MQ=255) gg‑‑‑cGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTCGACCGGGGAAGTCg < 5:67190/149‑1 (MQ=255) | CAGGGGCGATAACCCAAGTACCCGCGCCGCCTCCATCAGGCCCTTGCCCTGAGCCAGGAAAGCCGTGCGCGCCAACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGG‑‑‑CGCATTGGCCCGAACA‑CCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCAGCGTCGACCGGGGAAGTCG > NC_002947/5927364‑5927658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |