| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,043,666 | T→A | 10.4% | intergenic (+18/+16) | gmk → / ← PP_5297 | deoxyguanylate kinase/guanylate kinase/amino acid transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,043,666 | 0 | T | A | 10.4% | 183.1 / 11.2 | 67 | intergenic (+18/+16) | gmk/PP_5297 | deoxyguanylate kinase/guanylate kinase/amino acid transporter |
| Reads supporting (aligned to +/- strand): ref base T (27/33); new base A (4/3); total (31/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.57e-01 | |||||||||||
CGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACACCAGC > NC_002947/6043522‑6043814 | cGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCa < 3:239825/149‑1 (MQ=255) atcatcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGccc > 3:16678/1‑149 (MQ=255) atcatcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGccc < 3:99539/149‑1 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATgg > 8:250259/1‑149 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATg < 3:152352/148‑1 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATg < 1:71437/148‑1 (MQ=255) atgatgATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGt > 8:252030/1‑149 (MQ=255) tgatTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa < 7:250259/148‑1 (MQ=255) tgatTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAg < 1:219728/149‑1 (MQ=255) atTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTc < 4:16678/149‑1 (MQ=255) ttCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCt > 5:117206/1‑149 (MQ=255) ttCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCAATGCAGCCCCatcga > 4:37560/1‑136 (MQ=255) ttCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCAATGCAGCCCCatcga < 3:37560/140‑5 (MQ=255) gcgcTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGc > 5:313271/1‑148 (MQ=255) cgcTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCaa < 3:249182/149‑1 (MQ=255) gcTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAg < 3:188577/149‑1 (MQ=255) gcTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAg < 5:298607/149‑1 (MQ=255) tGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTAATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTTCATTGCAGCCACAATGGGTTAGTCCTGCAGCGGCAAgg > 1:89990/1‑148 (MQ=255) cAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGc > 1:194209/1‑149 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGGAGCCCCAATGGTTTa > 5:280941/1‑123 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa < 6:280941/123‑1 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCaa < 5:40833/138‑1 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCaa > 6:40833/1‑138 (MQ=255) gAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCctgct < 6:313271/147‑1 (MQ=255) aGCAGTGTTCCGCTCGAAGCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt < 6:120907/116‑1 (MQ=255) aGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAgg < 1:14330/149‑1 (MQ=255) tgtTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAgg > 3:206841/1‑147 (MQ=255) tgtTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAgg < 4:206841/147‑1 (MQ=255) tCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAg < 7:209278/149‑1 (MQ=255) gctgctgctGAAGACGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGCTCGATGGGGCTGCCTTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTAc < 7:252030/149‑1 (MQ=255) ctgctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACg > 1:310372/1‑149 (MQ=255) tgctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGa < 3:37947/139‑1 (MQ=255) tgctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGa > 4:37947/1‑139 (MQ=255) gctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGgc > 5:304424/1‑149 (MQ=255) ctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGgcg > 5:295574/1‑149 (MQ=255) agcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCAt < 3:61055/149‑1 (MQ=255) gcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGcgca > 1:289720/1‑143 (MQ=255) gcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGcgca < 2:289720/143‑1 (MQ=255) cagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATgc > 1:262692/1‑149 (MQ=255) agcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAgg < 3:265563/114‑1 (MQ=255) agcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAgg > 4:265563/1‑114 (MQ=255) gcagcagcGTCATGCGTCATTGATCAAGCAAATGATCGGCTGAAGATCGATGGGGCTTCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATgcgc < 2:89990/149‑1 (MQ=255) agcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGa > 3:307703/1‑149 (MQ=255) cagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACa > 2:244483/1‑149 (MQ=255) cGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTGCGCCGGCGCACGCATGCGCGACAGca < 6:117206/149‑1 (MQ=255) gCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGc < 4:307703/149‑1 (MQ=255) cTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGc < 1:131924/149‑1 (MQ=255) aaGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCa < 2:190820/148‑1 (MQ=255) gCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAg > 6:291954/1‑148 (MQ=255) tCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAgat > 1:12026/1‑149 (MQ=255) tCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAgat < 5:291954/149‑1 (MQ=255) aaGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATcgc < 2:262692/148‑1 (MQ=255) gATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGcc < 5:316470/128‑1 (MQ=255) gATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGcc > 6:316470/1‑128 (MQ=255) tCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCaa > 6:55749/1‑149 (MQ=255) attGGGGCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGc < 7:213356/121‑1 (MQ=255) attGGGGCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGc > 8:213356/3‑123 (MQ=255) attGGGGCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAAt > 6:31740/3‑148 (MQ=255) ttGGGGCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCaa < 4:113786/145‑1 (MQ=255) ttGGGGCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCaa > 3:113786/2‑146 (MQ=255) gCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGaa > 1:128501/1‑148 (MQ=255) cTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGcatcat < 6:206488/105‑1 (MQ=255) cTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGcatcat > 5:206488/1‑105 (MQ=255) tGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCa < 2:326555/121‑1 (MQ=255) tGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCa > 1:326555/1‑121 (MQ=255) aTTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATcgc < 4:142319/131‑1 (MQ=255) aTTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATcgc > 3:142319/1‑131 (MQ=255) ttGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACAccagc > 3:318623/1‑149 (MQ=255) | CGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACACCAGC > NC_002947/6043522‑6043814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |