Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,099,753 T→C 100% intergenic (‑188/‑61) kdsD ← / → mlaF D‑arabinose 5‑phosphate isomerase/ABC transporter ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,099,7530TC93.0% 166.0 / 1.9 57intergenic (‑188/‑61)kdsD/mlaFD‑arabinose 5‑phosphate isomerase/ABC transporter ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base T (3/1);  new base C (22/31);  total (25/32)
Fisher's exact test for biased strand distribution p-value = 3.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.11e-01
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TGAAAACCCTCACCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGTGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTGGTTCGCGCAGCATTTTCAGCAACGTGGACATCA  >  NC_002947/1099615‑1099901
                                                                                                                                          |                                                                                                                                                     
tgaAAACCCTCACCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGTGTGCCTTCCa                                                                                                                                             <  6:93806/149‑1 (MQ=255)
 gaAAACCCTCACCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTc                                                                                                                                               >  3:102324/1‑146 (MQ=255)
    aaCCCTCACCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATg                                                                                                                                         <  2:286317/149‑1 (MQ=255)
       ccTCACCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCACGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCAAGATGGAg                                                                                                                                      >  4:56842/1‑149 (MQ=255)
         tCACCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGc                                                                                                                                    >  5:216967/1‑149 (MQ=255)
           aCCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGc                                                                                                                                    <  4:176274/147‑1 (MQ=255)
              tcctcGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCg                                                                                                                               >  7:108818/1‑149 (MQ=255)
                ctcGATTGTTTCAGTTAAAACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCTGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCTCGTGCCTTCCAGATGGAGGCCgtcgtc                                                                                                                             <  6:182260/149‑1 (MQ=255)
                    aTTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCAtt                                                                                                                         <  7:13064/149‑1 (MQ=255)
                     ttgttgCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCAt                                                                                                                          >  4:228234/1‑147 (MQ=255)
                     ttgttgCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTa                                                                                                                        <  1:62450/149‑1 (MQ=255)
                     ttgttgCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTa                                                                                                                        <  2:294323/149‑1 (MQ=255)
                       gttgCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAg                                                                                                                       <  3:125525/148‑1 (MQ=255)
                                     caccaAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCGGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCAt                                                                                                         >  5:15270/1‑147 (MQ=255)
                                     caccaAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCAt                                                                                                         >  1:144163/1‑147 (MQ=255)
                                      accaAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAg                                                                                                      <  2:144163/149‑1 (MQ=255)
                                        caAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑Gc                                                                                                              <  7:277784/139‑1 (MQ=255)
                                        caAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑Gc                                                                                                              >  8:277784/1‑139 (MQ=255)
                                          aaGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAg                                                                                                  <  4:102324/149‑1 (MQ=255)
                                                      gggCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCGGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGa                                                                                      <  6:15270/149‑1 (MQ=255)
                                                      gggCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGa                                                                                      <  3:279835/149‑1 (MQ=255)
                                                          tGAACGACTGCTTGACCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAgtgt                                                                                  >  6:234528/1‑149 (MQ=255)
                                                           tatcGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTACCTTCCAGATGGAGGCCGGc                                                                                                                                <  4:190986/100‑1 (MQ=255)
                                                           gAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGtgtg                                                                                 <  8:108818/149‑1 (MQ=255)
                                                            ctcGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAGAGCTGCATTAGCAAGGAGTCTAGATGAgtgt                                                                                  <  1:198092/146‑1 (MQ=255)
                                                            aaCGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCg                                                                                                                               <  7:221418/103‑1 (MQ=255)
                                                            aaCGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCg                                                                                                                               >  8:221418/1‑103 (MQ=255)
                                                             aCGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCTTTAGCAAGGAGTCTAGATGAGTGTGGa                                                                               <  1:183088/149‑1 (MQ=255)
                                                              cGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGAt                                                                              <  7:156905/149‑1 (MQ=255)
                                                               gACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAgtgt                                                                                  >  2:198092/1‑144 (MQ=255)
                                                               gACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGa                                                                               >  2:190816/1‑147 (MQ=255)
                                                                 cTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGTGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAgc                                                                           >  4:201890/1‑149 (MQ=255)
                                                                  tGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAgcg                                                                          >  1:225761/1‑149 (MQ=255)
                                                                          cGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTAcgcg                                                                  >  1:54516/1‑149 (MQ=255)
                                                                           ggCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCgg                                                                 >  1:245213/1‑149 (MQ=255)
                                                                            gCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGt                                                                <  1:190816/149‑1 (MQ=255)
                                                                             ccTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGa                                                                                         <  3:8688/123‑1 (MQ=255)
                                                                             ccTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGa                                                                                         >  4:8688/1‑123 (MQ=255)
                                                                                 ggggcggggcTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAg                                                            <  6:216967/148‑1 (MQ=255)
                                                                                 ggggcggggcTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGt                                                           >  8:80256/1‑149 (MQ=255)
                                                                                  gggcggggcTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGtt                                                          <  2:54516/149‑1 (MQ=255)
                                                                                  gggcggggcTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGt                                                           <  3:228234/148‑1 (MQ=255)
                                                                                         gcTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGa                                                   <  3:190665/149‑1 (MQ=255)
                                                                                               aGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTAc                                                                     >  5:232951/1‑125 (MQ=255)
                                                                                               aGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTAc                                                                     <  6:232951/125‑1 (MQ=255)
                                                                                               aGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAAc                                              <  3:56842/148‑1 (MQ=255)
                                                                                                gCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGTGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCt                                            >  8:271991/1‑149 (MQ=255)
                                                                                                       tataGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGa                                                        <  2:26596/130‑1 (MQ=255)
                                                                                                       tataGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGa                                                        >  1:26596/1‑130 (MQ=255)
                                                                                                         taGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGt                                    <  4:152562/148‑1 (MQ=255)
                                                                                                         taGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTg                                   <  2:225761/149‑1 (MQ=255)
                                                                                                          aGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGCTTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAT‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTg                                   <  5:140746/148‑1 (MQ=255)
                                                                                                               gccgcTATTCGGCCTGTCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGt                                                                                                                              >  4:12910/1‑53 (MQ=255)
                                                                                                                   cTATTCGGCCTGTCAGGGGTGCGTGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTGGTTCGCgcag                         >  1:180080/1‑149 (MQ=255)
                                                                                                                               tCAGGGGTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTGGTTCGCGCAGCATTTTCAGCaa             <  7:80256/149‑1 (MQ=255)
                                                                                                                                   gggTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTGGTTCGCGCAGCATTTTCAGCAACGTg         >  2:29093/1‑149 (MQ=255)
                                                                                                                                     gTGCGCGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTGGTTCGCGCAGCATTTTCAGCAACGTGGa       >  5:95969/1‑149 (MQ=255)
                                                                                                                                          tgtgCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTGGTTCGCGCAGCATTTTCAGCAACGTGGACATCa  <  7:271991/149‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                                     
TGAAAACCCTCACCTCCTCGATTGTTGCAGTGAATACCACCAAAGCCTGTCCCGGGGCTGAACGACTGCTTGTCCGGCCTTGGGGCGGGGCTGTCAGCGGTGCTATAGTTCGCCGCTATTCGGCCTGTCAGGGGTGCGTGTGCCTTCCAGATGGAGGCCGGCGTCCATTAGGACGAG‑GCTGCATTAGCAAGGAGTCTAGATGAGTGTGGATAGCGCCTACGCGGTCGAGTTGAAGGGAGTAACCTTCAAACGTGGTTCGCGCAGCATTTTCAGCAACGTGGACATCA  >  NC_002947/1099615‑1099901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑