Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,191,514 A→G 10.1% intergenic (+70/+60) xcpX → / ← upxB type II secretion system protein K/phosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,191,5140AG10.1% 152.7 / 6.3 59intergenic (+70/+60)xcpX/upxBtype II secretion system protein K/phosphatase
Reads supporting (aligned to +/- strand):  ref base A (27/26);  new base G (3/3);  total (30/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGGGTGGTGCAATGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCGTACGGTAGCCCCAGCCGGCG  >  NC_002947/1191370‑1191656
                                                                                                                                                 |                                                                                                                                               
ggggTGGTGCAATGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGc                                                                                                                                              <  1:74758/147‑1 (MQ=255)
       tgCAATGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGcc                                                                                                                                     <  7:136405/149‑1 (MQ=255)
           aTGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCcgc                                                                                                                                  >  7:260129/1‑148 (MQ=255)
            tGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGa                                                                                                                                                 <  8:172460/133‑1 (MQ=255)
            tGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGa                                                                                                                                                 >  7:172460/1‑133 (MQ=255)
            tGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCcgcg                                                                                                                                 >  1:123209/1‑148 (MQ=255)
              gCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCcgcg                                                                                                                                 >  7:219375/1‑146 (MQ=255)
                  gCCCGCGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGAAAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGc                                                                                                                          <  4:224147/149‑1 (MQ=255)
                     cGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCgg                                                                                                                       >  7:15413/1‑149 (MQ=255)
                         tACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTAca                                                                                                                   <  3:118183/149‑1 (MQ=255)
                              gcgcAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACTGGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTAcagc                                                                                                                 >  1:251553/1‑147 (MQ=255)
                                   acaaGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCaaaa                                                                                                         <  7:82822/149‑1 (MQ=255)
                                                cGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCg                                                                                             <  4:286551/148‑1 (MQ=255)
                                                  tAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCa                                                                                          >  1:33453/1‑149 (MQ=255)
                                                  tAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCa                                                                                          >  2:327521/1‑149 (MQ=255)
                                                   aGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCAc                                                                                         >  1:169138/1‑149 (MQ=255)
                                                       gggAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCTAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGa                                                                                     <  8:260129/149‑1 (MQ=255)
                                                         gAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGc                                                                                                                          >  4:57236/1‑110 (MQ=255)
                                                         gAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGc                                                                                                                          <  3:57236/110‑1 (MQ=255)
                                                             cGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGATCCCCCCGTAGGAGCGGGCTTGCCCGCGTAGAGGCCGGTACAGCCAGCAATAGTTGGCTGCCCGGCACGGGATCAAAc                                                                               >  6:271555/1‑149 (MQ=255)
                                                             cGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAAc                                                                               <  2:271829/149‑1 (MQ=255)
                                                             cGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAAc                                                                               <  1:120409/149‑1 (MQ=255)
                                                              gATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCTTAGGAGCCTTGCTTGCCCGCTAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAAc                                                                               <  1:94624/149‑1 (MQ=255)
                                                                  gCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTcc                                                                          <  8:219375/149‑1 (MQ=255)
                                                                   ccTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTccc                                                                         <  2:169138/149‑1 (MQ=255)
                                                                       gTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGGGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGAtc                                                                     >  6:165180/1‑149 (MQ=255)
                                                                            gTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGCTCTcccc                                                                >  8:275057/1‑149 (MQ=255)
                                                                            gTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTcccc                                                                <  2:123209/149‑1 (MQ=255)
                                                                            gTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTccc                                                                 >  4:315033/1‑148 (MQ=255)
                                                                                aCCGACCTCTTCGCGGGCAAATCCGCCCCTAGGCTGGGTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATc                                                                                   <  8:257985/126‑1 (MQ=255)
                                                                                aCCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCccacca                                                            >  3:290232/1‑149 (MQ=255)
                                                                                aCCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCccacca                                                            >  5:248248/1‑149 (MQ=255)
                                                                                aCCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCccacc                                                             <  1:327521/148‑1 (MQ=255)
                                                                                aCCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTAGGCTGACCGGCACGGGATc                                                                                   >  7:257985/1‑126 (MQ=255)
                                                                                    ggcctcttcgcgggcaagcccgctcctacggggggttcactggtttcagaaccagCGTAGGGGCGGATTTGCCCGCTAAGAGGTCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATc                                                          <  7:182068‑M1/93‑1 (MQ=255)
                                                                                      cctcttcgcgggcaagcccgctcctacggggggttcactggtttcagaaccagCGTAGGGGCGGATTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTccc                                                                 <  3:166025‑M1/86‑1 (MQ=255)
                                                                                      cctcttcgcgggcaagcccgctcctacggggggttcactggtttcagaaccagCGTAGGGGCGGATTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTccc                                                                 >  4:166025‑M1/54‑139 (MQ=255)
                                                                                        tctTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTc                                                                           >  6:2217/1‑127 (MQ=255)
                                                                                        tctTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTc                                                                           <  5:2217/127‑1 (MQ=255)
                                                                                            aGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCt                                                  <  3:315033/148‑1 (MQ=255)
                                                                                            aGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGAGAACCCCCCGTAGGACCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGATGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGc                                                   <  5:271555/147‑1 (MQ=255)
                                                                                             gCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTg                                                 <  2:320509/148‑1 (MQ=255)
                                                                                             gCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTg                                                 >  1:320509/1‑148 (MQ=255)
                                                                                                     aTCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATc                                             <  2:29564/144‑1 (MQ=255)
                                                                                                     aTCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATc                                             >  1:29564/1‑144 (MQ=255)
                                                                                                      tCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCAAGCAAAAGTTGGCTGACCGGCACTGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCaccacc                                       >  2:13421/1‑149 (MQ=255)
                                                                                                         gCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTc                                    >  6:85692/1‑149 (MQ=255)
                                                                                                         gCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTc                                    >  1:200307/1‑149 (MQ=255)
                                                                                                            ccTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGaa                                 <  6:248248/149‑1 (MQ=255)
                                                                                                             ctacggggggttcactggtttcagaaccagCGTAGGGGCGGATTTGCCCGCTAAGAGGTCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGaa                                 >  8:182068‑M1/31‑148 (MQ=255)
                                                                                                                cGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGGGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGc                               <  5:165180/147‑1 (MQ=255)
                                                                                                                  cTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCGCCACCGTCGAAGCCcgc                           <  2:251553/149‑1 (MQ=255)
                                                                                                                     gTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGAt                                              <  8:69776/127‑1 (MQ=255)
                                                                                                                     gTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGAt                                              >  1:130343/1‑127 (MQ=255)
                                                                                                                     gTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGAt                                              >  7:69776/1‑127 (MQ=255)
                                                                                                                       tCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCg                      >  3:69513/1‑149 (MQ=255)
                                                                                                                        cTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCg                      >  3:159677/1‑148 (MQ=255)
                                                                                                                               cAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCGTACGGTAg              >  7:117792/1‑149 (MQ=255)
                                                                                                                                     aCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCGTACGGTAGCCCCAg        >  7:91867/1‑149 (MQ=255)
                                                                                                                                     aCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCGTACGGTAGCCCCAg        <  4:233658/149‑1 (MQ=255)
                                                                                                                                           cGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCGTACGGTAGCCCCAGCCGGCg  <  5:85692/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
GGGGTGGTGCAATGGCATGCCCGTGTACCTGCGCAACAAGTGCGGGTGCGTAGCCGGGAGCCGATAGCCTGGTAACGTTCACCGACCTCTTAGCGGGCAAATCCGCCCCTACGCTGGTTCTGAAACCAGTGAACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGCCAGCAAAAGTTGGCTGACCGGCACGGGATCAAACGGTCCCGATCTCCCCACCATCAATACGCTGGATCACCACCGTCGAAGCCCGCGGCCGTACGGTAGCCCCAGCCGGCG  >  NC_002947/1191370‑1191656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: