| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,269,389 | C→G | 6.5% | D15H (GAT→CAT) | PP_1109 ← | GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,269,389 | 0 | C | G | 6.5% | 235.2 / 7.4 | 77 | D15H (GAT→CAT) | PP_1109 | GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (33/39); new base G (2/3); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.16e-01 | |||||||||||
AAGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAA > NC_002947/1269241‑1269520 | aaGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATc < 8:48837/149‑1 (MQ=255) tAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAg < 1:116804/149‑1 (MQ=255) tAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCAGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAg > 2:174272/1‑149 (MQ=255) accgcGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGc < 5:43889/145‑1 (MQ=255) ccTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCg > 5:240737/1‑149 (MQ=255) gCCCGGGTGATGCCGTCAACACACCTTCGCTGCCGAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGGCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgag < 3:43244/147‑3 (MQ=255) gCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCgttgt > 7:30962/1‑149 (MQ=255) cccGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagtgg < 8:66056/149‑6 (MQ=255) cGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTc < 6:240737/149‑1 (MQ=255) gggTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTc > 4:280705/1‑148 (MQ=255) tGCCGTCAACACAGCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGGGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGGCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAgg < 2:247575/148‑1 (MQ=255) tCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagt < 4:222401/133‑4 (MQ=255) tCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagt > 3:222401/1‑130 (MQ=255) acacCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCgttgt > 2:233744/1‑129 (MQ=255) cacCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTg < 2:316996/149‑1 (MQ=255) ttCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAgg > 7:216657/1‑149 (MQ=255) tGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGAt > 3:58018/1‑148 (MQ=255) aCCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATc < 4:58018/147‑1 (MQ=255) ccAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATg < 1:174272/149‑1 (MQ=255) cAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATgg > 8:231075/1‑149 (MQ=255) cAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATgg < 3:280705/149‑1 (MQ=255) cAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATgg < 1:198755/149‑1 (MQ=255) aGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGc < 3:294502/149‑1 (MQ=255) cTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAg < 5:317856/149‑1 (MQ=255) ggCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGt > 1:91421/1‑149 (MQ=255) gACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGtt < 2:91938/149‑1 (MQ=255) gACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGtt < 8:30962/149‑1 (MQ=255) acacGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa < 8:197213/149‑1 (MQ=255) acacGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa < 6:42482/149‑1 (MQ=255) gacgTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaa > 3:200908/1‑148 (MQ=255) gacgTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaa > 4:274936/1‑148 (MQ=255) gtcgtGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaa > 3:184929/1‑148 (MQ=255) gtcgtGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaa > 7:234712/1‑148 (MQ=255) gtGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaaaaa < 3:274936/148‑1 (MQ=255) tGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCCTTGCCCGGGCAACCACTCCCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAACGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAg > 6:172203/1‑148 (MQ=255) tGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa > 3:313348/1‑131 (MQ=255) tGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa < 4:313348/131‑1 (MQ=255) aaGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAg > 8:456/1‑71 (MQ=255) aaGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAg < 7:456/71‑1 (MQ=255) gTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTaa < 3:261525/149‑1 (MQ=255) gTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTaa < 1:219511/149‑1 (MQ=255) tCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAAc > 3:45375/1‑142 (MQ=255) tCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAAc < 4:45375/142‑1 (MQ=255) tCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAAc < 7:231075/149‑1 (MQ=255) tGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAg > 2:35194/1‑131 (MQ=255) tGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAg < 1:35194/131‑1 (MQ=255) cAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACgg < 4:301190/144‑1 (MQ=255) cAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACgg > 3:301190/1‑144 (MQ=255) cGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCtt < 1:232378/149‑1 (MQ=255) tCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTc > 4:119897/1‑149 (MQ=255) aGCTTTC‑GGATTGATGGGATGCGTTGCCCGGGCATCCACTCTCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGGAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGa < 1:193108/149‑1 (MQ=255) ttGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGa > 3:58805/1‑146 (MQ=255) ttGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGa > 3:63064/1‑146 (MQ=255) ttGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGa < 4:58805/146‑1 (MQ=255) ttGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGa < 4:63064/146‑1 (MQ=255) ttGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTg < 8:216657/149‑1 (MQ=255) c‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTc < 2:91421/149‑1 (MQ=255) aTGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGtt > 3:50196/1‑149 (MQ=255) tGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGttt < 8:234712/149‑1 (MQ=255) gAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTg < 4:50196/148‑1 (MQ=255) aGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTTGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGc > 5:301246/1‑148 (MQ=255) gTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTc < 3:270751/125‑1 (MQ=255) gTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTc > 4:270751/1‑125 (MQ=255) gTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAg > 2:137353/1‑149 (MQ=255) gCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGATACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGca > 5:22404/1‑148 (MQ=255) gCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGc < 6:55249/143‑1 (MQ=255) gCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGc > 5:55249/1‑143 (MQ=255) cccGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGcaca > 8:258535/1‑149 (MQ=255) gggCTACCACTCGCCTGAATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCATGGGATCATGGCAGGTCCGAAAGCGTTAGAAAAATAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGc < 5:64989/149‑1 (MQ=255) gggCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGc < 7:258535/149‑1 (MQ=255) ggCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCa > 6:27696/1‑140 (MQ=255) ggCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCa < 5:27696/140‑1 (MQ=255) cAACCACTCGCCTGCATCCAGGCGTTGTCTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTcc < 4:130713/69‑1 (MQ=255) cAACCACTCGCCTGCATCCAGGCGTTGTCTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTcc > 3:130713/1‑69 (MQ=255) gaaacaacGCCTGGATGCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCaa > 6:48181/8‑148 (MQ=255) cACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaa > 6:325239/1‑78 (MQ=255) cACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaa < 5:325239/78‑1 (MQ=255) tCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaaaaa > 8:298099/1‑81 (MQ=255) | AAGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGC‑GGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAA > NC_002947/1269241‑1269520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |