| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,631,095 | C→A | 8.6% | intergenic (+29/‑152) | PP_1430 → / → lepA | DegP‑like serine endoprotease/elongation factor 4 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,631,095 | 0 | C | A | 8.6% | 249.6 / 10.1 | 86 | intergenic (+29/‑152) | PP_1430/lepA | DegP‑like serine endoprotease/elongation factor 4 |
| Reads supporting (aligned to +/- strand): ref base C (40/38); new base A (3/5); total (43/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.22e-01 | |||||||||||
GTTCGGCCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTT > NC_002947/1630951‑1631241 | gTTCGGCCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCt > 5:71237/1‑149 (MQ=255)gTTCGGCCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCt > 4:175356/1‑149 (MQ=255) ggCCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGcc < 2:36259/148‑1 (MQ=255) cAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCttt > 1:163921/1‑149 (MQ=255) cAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCAAAAGGGCAGCCGAAGCTGCCCttt < 4:89504/149‑1 (MQ=255) aaGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCtttt > 8:283675/1‑149 (MQ=255) aaGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCtttt > 6:237521/1‑149 (MQ=255) aaGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCCGAAGCTGCCCtttc < 7:198344/149‑2 (MQ=255) aGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCttttt < 8:88900/149‑1 (MQ=255) aGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCCGAAGCTGCCCtttcg < 6:260533/149‑3 (MQ=255) aaTTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAATCATTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCAt < 7:205153/149‑1 (MQ=255) aaTTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCAt > 2:313064/1‑149 (MQ=255) aTTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCCGAAGCTGCCCtttcgcctt < 4:165352/149‑7 (MQ=255) tCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCCGAAGCTGCCCtttc < 8:157301/142‑2 (MQ=255) tCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCCGAAGCTGCCCtttc > 7:157301/1‑141 (MQ=255) ccGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATGACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCt > 8:298352/1‑149 (MQ=255) cGAAATCGCCAAGGAACTGCCGTAGAATCGTTCCGTGTGGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCATCTTCGGCTGCCCTTTTTCATGAATCtt < 4:157228/149‑1 (MQ=255) cGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCtt < 6:311861/149‑1 (MQ=255) cGAAATCGCCAAGGAACTCCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATGACTTTCAAGCTTGCTGAATAAGCACTTTCGCAAGGCGAAACGGCAGCTTCGGCTGACCTTTTTCATGAATCt > 3:157228/1‑148 (MQ=255) gCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAAtt < 6:15368/149‑1 (MQ=255) ccAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCACGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTGTTTCATGAATCTT‑CCCAAttt > 1:326008/1‑148 (MQ=255) cAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCa > 4:19351/1‑132 (MQ=255) cAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCa < 3:19351/132‑1 (MQ=255) ggAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCgg < 4:200274/149‑1 (MQ=255) ccGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGAtt > 6:266499/1‑149 (MQ=255) cGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTg < 3:175356/149‑1 (MQ=255) gaagaaTCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGc > 5:312687/1‑149 (MQ=255) aagaaTCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCt < 5:237521/149‑1 (MQ=255) ttCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAg > 6:142366/1‑149 (MQ=255) cGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTc < 5:142366/148‑1 (MQ=255) tgtCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGa > 3:295209/1‑149 (MQ=255) gtCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGa > 2:290502/1‑148 (MQ=255) gcgTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCtgtg < 5:217069/130‑1 (MQ=255) gcgTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCtgtg < 5:221816/130‑1 (MQ=255) gcgTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCtgtg > 6:221816/1‑130 (MQ=255) gcgTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCtgtg > 6:217069/1‑130 (MQ=255) tGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACaga > 2:81081/1‑138 (MQ=255) tGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACaga < 1:81081/138‑1 (MQ=255) tGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCAGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCa > 2:260869/1‑149 (MQ=255) cGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCAt > 2:93798/1‑148 (MQ=255) cGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCAt < 5:266499/148‑1 (MQ=255) gTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATaa < 1:313064/149‑1 (MQ=255) tCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGTATGATTGCTGTGTACAGTCGGACAGAGGAATATCACATAAc > 7:122158/1‑149 (MQ=255) gggCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAAcc > 1:174197/1‑147 (MQ=255) ggCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCcag > 3:9070/1‑149 (MQ=255) gCCGTGCCAGCTTCATCTCTTTCAAGCTTGCTTAATAAGCAGTTTCTCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATTAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCcagc < 2:326008/149‑1 (MQ=255) gCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCcag > 1:201801/1‑148 (MQ=255) ccGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCcagca < 7:283675/149‑1 (MQ=255) gTGCCATCTTCATCACTTTCAATCTTGCTGTATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTTCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCagcagc < 3:182247/149‑1 (MQ=255) aGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAg < 4:295209/149‑1 (MQ=255) aGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAg < 2:163921/149‑1 (MQ=255) caCTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCTGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATa < 6:302499/126‑1 (MQ=255) caCTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCTGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATa > 5:302499/1‑126 (MQ=255) aCTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTc > 1:245601/1‑149 (MQ=255) tttCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTccc < 2:174197/149‑1 (MQ=255) gCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTa > 1:11603/1‑135 (MQ=255) gCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTa < 2:11603/135‑1 (MQ=255) tAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTaa > 6:129764/1‑121 (MQ=255) tAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTaa < 5:129764/121‑1 (MQ=255) tAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTcggcgg < 7:298352/149‑1 (MQ=255) aGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCggcgggc > 6:139884/1‑149 (MQ=255) gCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCggcgggcg > 6:166223/1‑149 (MQ=255) aGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCtgtg < 5:62304/75‑1 (MQ=255) aGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCtgtg > 6:62304/1‑75 (MQ=255) aGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTAttttt > 8:210661/1‑138 (MQ=255) aGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTAttttt < 7:210661/138‑1 (MQ=255) gTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCGTTTTTCATGAATCTTACACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTc > 1:77613/1‑149 (MQ=255) gTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTcc < 6:312687/149‑1 (MQ=255) tttCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCg > 2:22265/1‑149 (MQ=255) gCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTc < 1:93798/149‑1 (MQ=255) gCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTc < 2:245601/149‑1 (MQ=255) cAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCg > 5:269185/1‑149 (MQ=255) aGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCa < 4:284749/149‑1 (MQ=255) aGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCa < 1:290502/149‑1 (MQ=255) tgaaaaaGGGCAGCCGCAGCTGCCCTTTTTCATGCATCTT‑CCCAATGGCCGGAATGATTGCTGTGGACAGGCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATGCCCGGCGAGTTTTCGGCGGGCGTCCGGCTCGccg > 5:176795/5‑147 (MQ=255) ggCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTACCGGCTATTTTTCGGCGGGCGTCCGGATCGCAg > 7:153215/1‑149 (MQ=255) gaaaaaGGGCAGCCGAAGCTGGCCTTATTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCAAGCAGCTTAATGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTagcagc > 7:178478/4‑149 (MQ=255) gaaaaaGGGCAGCCGAAGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGc > 3:108452/4‑149 (MQ=255) gAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCa > 7:131536/1‑145 (MQ=255) gAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCa < 8:131536/145‑1 (MQ=255) gggCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTc < 6:269185/149‑1 (MQ=255) gCAGCTTCTGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGCAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGa < 6:71237/149‑1 (MQ=255) gCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGa > 7:215248/1‑149 (MQ=255) atcTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTCCCCTAATGATTGCTGTGTACAGTCTGACAGTGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCGGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAgt < 7:304455/147‑1 (MQ=255) aGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAgt < 2:77613/149‑1 (MQ=255) ttCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAAACCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGtt > 7:122736/1‑149 (MQ=255) cGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGtt < 8:215248/147‑1 (MQ=255) | GTTCGGCCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTCGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTT‑CACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTT > NC_002947/1630951‑1631241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |