| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,668,450 | T→A | 6.1% | intergenic (+75/‑107) | ffh → / → rpsP | signal recognition particle GTPase subunit/30S ribosomal protein S16 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,668,450 | 0 | T | A | 6.1% | 232.7 / 3.1 | 76 | intergenic (+75/‑107) | ffh/rpsP | signal recognition particle GTPase subunit/30S ribosomal protein S16 |
| Reads supporting (aligned to +/- strand): ref base T (36/35); new base A (3/2); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
CCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGATTTGCAGTACCAGCTGCTGT > NC_002947/1668302‑1668598 | ccAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAt > 4:200613/1‑149 (MQ=255)ccAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAt > 8:65594/1‑149 (MQ=255)ccAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAt > 4:232637/1‑149 (MQ=255) gcggcATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAATTcgcg > 7:144580/1‑149 (MQ=255) ggcATGGCCATGATGATGCGCGGCCTCGGGGGCATGCTGCCTGGTGGCGGCATGCCAATGCTTTAACCCCTGATCCGGTTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCgcggc < 1:267888/149‑1 (MQ=255) cATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCgcggcg > 5:317467/1‑148 (MQ=255) aTGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGgcgc > 8:87563/1‑148 (MQ=255) aTGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAATTCgcggctgt < 8:144580/149‑4 (MQ=255) ggCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAAc > 2:257885/1‑149 (MQ=255) cAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAATTCgcggctgttg < 3:297362/146‑6 (MQ=255) cAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAATTCgcggctgttg > 4:297362/1‑141 (MQ=255) tgaggCGCGGCCTCGGTGGGAAGCTGCCAGGGGGCGGCATGCCAAAGCTGTAACCCCTGAACCGGGGGCCGGCCTTTTGGCCGGCTAGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCaaa < 1:263909/149‑1 (MQ=255) cgcgGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGa < 3:232637/149‑1 (MQ=255) ggCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACgg > 8:181964/1‑149 (MQ=255) tGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAAGGcct > 7:186920/1‑147 (MQ=255) ggATGCTGCCAGGTGGCGGCATGCCGAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAg < 5:78236/148‑1 (MQ=255) gctgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCtt > 6:202717/1‑149 (MQ=255) gctgcCACGTCGCGGCAAGCCAAAGCTGTAACCCCTGATCCGGCTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCTCAGTAGCGGCCCACCAGCCGCGAAATTCGCGGCCCAACAGGCAAATCTCGACGTCAGGGCGAGGCCtt > 4:184463/1‑149 (MQ=255) ccAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGc < 6:301097/147‑1 (MQ=255) ggTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAAGGCCTCGCCCTGCCgtcc < 8:186920/149‑4 (MQ=255) tGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGaaaaa < 7:65594/149‑1 (MQ=255) gcggcATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCgcggc < 2:141130/103‑1 (MQ=255) gcggcATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCgcggc > 1:141130/1‑103 (MQ=255) gcATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCTGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCAt > 7:104265/1‑149 (MQ=255) ccAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGc < 7:181964/148‑1 (MQ=255) cAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTACCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCa > 7:251385/1‑148 (MQ=255) aaaGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACgg < 2:184654/114‑1 (MQ=255) aaaGCTGTAACCCCTGATCCGGGTGCCTCCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACgg > 1:184654/1‑114 (MQ=255) aaaGCTGTAACCCCTCATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCAGTAGCGCGCCAACAGCCGCGAATTTCGCCGCGCAACCGGCAAATCTGGACGGCACGGCGAGGCCTTGCCGAAAAAGTCATTTGCaaa > 2:104429/1‑149 (MQ=255) gCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACAACCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGAGAGGCCTTGCCGAAAAAGTCATTTGCAAATGt > 4:22304/1‑149 (MQ=255) cTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCTAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTc < 6:317467/149‑1 (MQ=255) tGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCAGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTcc > 6:156370/1‑149 (MQ=255) gTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCg > 5:89740/1‑149 (MQ=255) aCCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCTGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCgtgt < 4:40634/149‑1 (MQ=255) aCCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCgtg < 7:116849/148‑1 (MQ=255) cccTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTAt > 6:211227/1‑149 (MQ=255) cccTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTAt > 6:13360/1‑149 (MQ=255) tCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTcc < 6:334911/137‑1 (MQ=255) tCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTcc > 5:334911/1‑137 (MQ=255) cGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTcccc > 4:56748/1‑146 (MQ=255) cGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCga < 7:87563/148‑1 (MQ=255) cGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCga < 1:257885/148‑1 (MQ=255) ggTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGaa > 1:222491/1‑149 (MQ=255) cctgcctTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCCGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATg < 6:32033/149‑1 (MQ=255) cctgcctTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATg < 5:13360/149‑1 (MQ=255) ctgcctTTTGTCGGGC‑AGGCGCCCAGAACCCCCTCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCTCGGGGAatacac < 1:226639/149‑4 (MQ=255) ctgcctTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTTGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGc > 2:8579/1‑149 (MQ=255) ctgcctTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAGGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGc > 4:124971/1‑149 (MQ=255) ctgcctTTTGTCGGGC‑AGGCGCACAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCTCGGGGAatacac > 2:226639/1‑146 (MQ=255) tgcctTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCg > 3:92767/1‑149 (MQ=255) ctTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGcc > 7:167647/1‑149 (MQ=255) ttttGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCgaga > 3:156354/1‑138 (MQ=255) ttttGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCgaga < 4:156354/138‑1 (MQ=255) ttttGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCt > 2:101064/1‑149 (MQ=255) tGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGATTTTCGCGGCGCAACCGTCAAATCTGGAGGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCttt < 1:104429/148‑1 (MQ=255) tgggtc‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTg < 8:251385/143‑1 (MQ=255) tCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTg < 8:167647/148‑1 (MQ=255) gcCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAg < 3:104690/92‑1 (MQ=255) gcCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAg > 4:104690/1‑92 (MQ=255) gcCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCgtgt < 5:202717/149‑1 (MQ=255) gcCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCgtgt < 1:101064/149‑1 (MQ=255) gcCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCgtgt > 8:225896/1‑149 (MQ=255) gcCAAGAACCCCCGCTGTCGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCgtgt < 3:184463/149‑1 (MQ=255) tgttgccccGCTACAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTAGTCCCCGAGAATATGCGGCCTGTTGGGCACCCGTGTGCCt > 7:261961/6‑149 (MQ=255) aGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCt < 3:200613/149‑1 (MQ=255) cccccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGGGTGCCTAttt < 3:22304/149‑1 (MQ=255) ccccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAGGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTg < 3:124971/149‑1 (MQ=255) cccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTgg > 1:258986/1‑149 (MQ=255) cccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTgg > 4:288889/1‑149 (MQ=255) ccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCga < 2:13273/110‑1 (MQ=255) ccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCga > 1:13273/1‑110 (MQ=255) ccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTCGGGCACCCGTGTGACTATTTgg > 2:271382/1‑148 (MQ=255) cTGTAGCTGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCAtt < 8:104265/149‑1 (MQ=255) gCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGAt > 2:276816/1‑149 (MQ=255) cGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGAtt < 4:92767/149‑1 (MQ=255) ggCAACAGCCGCGAATTTTGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGATTTGc < 1:8579/149‑1 (MQ=255) cgcgAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGATTTGCAGTACCAgc > 1:274113/1‑149 (MQ=255) cgAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTTGGCACCCGTGTGCCTATTTGGCATTCAGATTTGCAGTACCAgctg > 2:244479/1‑149 (MQ=255) aTTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGATTTGCAGTACCAGctgctg < 3:56748/149‑1 (MQ=255) tttCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGATTTGCAGTACCAGCTGCTGt < 2:222491/149‑1 (MQ=255) | CCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGC‑AGGCGCCCAGAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCAGATTTGCAGTACCAGCTGCTGT > NC_002947/1668302‑1668598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |