Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,819,671 | G→T | 6.1% | E306* (GAA→TAA) ‡ | rpoS → | RNA polymerase sigma S factor |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,819,671 | 0 | G | T | 6.1% | 207.4 / 3.8 | 66 | E306* (GAA→TAA) ‡ | rpoS | RNA polymerase sigma S factor |
Reads supporting (aligned to +/- strand): ref base G (32/30); new base T (2/2); total (34/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.22e-01 |
ACCTGTCGCAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGTTTTTGTGTGCG > NC_002947/1819534‑1819815 | acCTGTCGCAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCgg < 5:221242/149‑1 (MQ=255) acCTGTCGCAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCgg < 7:208562/149‑1 (MQ=255) tCGCAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCaaa < 2:271212/148‑1 (MQ=255) gCAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATc > 4:313489/1‑148 (MQ=255) gCAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATc > 5:299164/1‑148 (MQ=255) cAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATc > 3:173141/1‑147 (MQ=255) cAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCa < 3:313489/149‑1 (MQ=255) aaGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAgg < 6:197067/149‑1 (MQ=255) aaGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAgg < 4:173141/149‑1 (MQ=255) aaGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAgg < 3:55223/149‑1 (MQ=255) ggtCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAgg < 8:197662/147‑1 (MQ=255) aTCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGa < 5:67584/121‑1 (MQ=255) aTCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGa > 6:67584/1‑121 (MQ=255) aGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTc < 2:199014/149‑1 (MQ=255) gTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAgc > 2:13603/1‑149 (MQ=255) gTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAgc > 2:262759/1‑149 (MQ=255) ggTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCtt > 4:191328/1‑149 (MQ=255) tGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGACTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTgc > 3:22278/1‑149 (MQ=255) gTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTgcgc > 6:267701/1‑148 (MQ=255) aCAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCgag < 5:329332/143‑1 (MQ=255) aCAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCgag > 6:329332/1‑143 (MQ=255) aCAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCtt > 7:24912/1‑149 (MQ=255) aCAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCtt < 3:191328/149‑1 (MQ=255) cagcGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAg > 1:222625/1‑111 (MQ=255) cagcGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAg < 2:222625/111‑1 (MQ=255) cagcGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGaa > 5:238682/1‑147 (MQ=255) gcGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAg > 4:70209/1‑148 (MQ=255) cGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAg < 4:60773/147‑1 (MQ=255) cGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGaa > 3:60773/1‑149 (MQ=255) gtgtcgTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGt < 1:8183/144‑1 (MQ=255) aaGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGt < 7:214823/149‑1 (MQ=255) gTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTTCACGGGtaagg > 1:273207/1‑86 (MQ=255) gTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTTCACGGGtaagg < 2:273207/90‑5 (MQ=255) cgccgcTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGc > 7:153468/1‑147 (MQ=255) gccgcTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAg > 1:72550/1‑149 (MQ=255) cTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCAt < 2:225327/149‑1 (MQ=255) gCCTTCGCGGCCATGAAAGCAGTACCCTTGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCATGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTc < 8:24912/149‑1 (MQ=255) gCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTc < 1:262759/149‑1 (MQ=255) cTTCGCGGCCATGAAAGCAGTACCCTGGAGGAGGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCa < 2:127345/149‑1 (MQ=255) ttCGCGGTCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGACCGGGTGCGGCAAATCCAGGTGGAAGGGCGCAAGCGCTTGCGCGAGATCCTGGAAAAGAATTGTCGGTCCAGCGAGTCATGGTTACAg > 6:253687/1‑149 (MQ=255) gcgGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGtag < 1:13603/149‑1 (MQ=255) gcgGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGta < 3:70209/148‑1 (MQ=255) ccATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGtagctag < 4:22278/149‑1 (MQ=255) ccATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGtagctag > 2:267852/1‑149 (MQ=255) gAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCt > 7:182378/1‑149 (MQ=255) gAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGAGAGATCCTTGAAAATAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCt > 5:325527/1‑149 (MQ=255) tgCAGTACCGTTGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACTGGTGCGGCATATCCAGGTGTAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAATGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTa < 5:141092/148‑1 (MQ=255) tACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACaa > 3:174225/1‑148 (MQ=255) cccTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACaaaa > 1:290325/1‑148 (MQ=255) tGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGt < 3:91329/120‑1 (MQ=255) tGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGt > 4:91329/1‑120 (MQ=255) tGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGtagcta > 4:113622/1‑131 (MQ=255) tGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGtagcta < 3:113622/131‑1 (MQ=255) tGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGt > 1:226606/1‑149 (MQ=255) cTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCg > 7:44607/1‑149 (MQ=255) gagaTCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCggg < 8:182378/148‑1 (MQ=255) gagaTCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCgg < 6:299164/147‑1 (MQ=255) aTCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTATCAAAAAACGCCCCGGTGATC‑TCGGGGCGt > 3:46410/1‑149 (MQ=255) tCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGtt > 3:89189/1‑149 (MQ=255) ggCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGtttt > 1:170342/1‑149 (MQ=255) gCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCC‑GAGATCACCGGGGCGttttt < 6:29623/149‑1 (MQ=255) ccgcaCCCGTTCACGGGTGCGGCAAATCCAGGTGTAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGttt > 1:49660/5‑146 (MQ=255) ccgcaCCCGTTCACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGttt < 2:49660/142‑1 (MQ=255) aCCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGTTTTtgtg < 4:174225/147‑1 (MQ=255) ccGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGTTTTTGTGTgcg > 1:327581/1‑149 (MQ=255) ccGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGGTTTTGTGTgcg > 4:168496/1‑149 (MQ=255) | ACCTGTCGCAAAGCATCGATCAGTGGTTGGGTGAGTTGACCGACAAGCAGCGTGAAGTGGTTGTACGCCGCTTTGGCCTTCGCGGCCATGAAAGCAGTACCCTGGAGGATGTTGGGCTGGAGATCGGCCTTACCCGTGAACGGGTGCGGCAAATCCAGGTGGAAGGGCTCAAGCGCTTGCGCGAGATCCTTGAAAAGAATGGTCTGTCCAGCGAGTCATTGTTCCAGTAGCTAGCGCTGTAACAAAAAACGCCCCGGTGATC‑TCGGGGCGTTTTTGTGTGCG > NC_002947/1819534‑1819815 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |