| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 198,367 | G→C | 6.1% | V1291V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 198,367 | 0 | G | C | 6.1% | 203.9 / 3.2 | 65 | V1291V (GTG→GTC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base G (28/33); new base C (2/2); total (30/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTCGGCCACTGTA > NC_002947/198224‑198514 | gCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCg > 6:334704/1‑148 (MQ=255)gCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCg > 3:144251/1‑148 (MQ=255) ggCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAgg < 8:288902/149‑1 (MQ=255) cATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCGCCTTCGGTCACCGAAgggg < 1:129702/147‑3 (MQ=255) tCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGAGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGCCGGt > 6:243268/1‑146 (MQ=255) aGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCAcc < 8:159386/147‑1 (MQ=255) aGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTa > 6:287206/1‑149 (MQ=255) ttACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGCCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTacac > 4:178579/1‑148 (MQ=255) aCCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCa < 8:120260/148‑1 (MQ=255) ccGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCAt < 5:146745/148‑1 (MQ=255) ccGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATc < 4:144251/149‑1 (MQ=255) cGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCa > 7:145756/1‑149 (MQ=255) cGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCa < 8:145756/149‑1 (MQ=255) cGACGCTACAGTTCAGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGACCGGCTACAGTTGAGATCTCGGAAACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGAACGAACGCGGTGAGATCACCTACACCATCa > 5:74618/1‑149 (MQ=37) cTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCt > 1:100729/1‑148 (MQ=255) cAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGAcc < 5:287206/149‑1 (MQ=255) cGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaaca > 8:300912/1‑147 (MQ=255) gTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGAc < 5:334704/149‑1 (MQ=255) ggCCAGCTTCTCGAAGGTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACg > 1:133802/2‑149 (MQ=255) ccACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaacaa > 8:114527/1‑142 (MQ=255) ccACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaacaa < 7:114527/142‑1 (MQ=255) ccACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGACGGt > 2:28785/1‑149 (MQ=255) aCCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCt > 7:37123/1‑149 (MQ=255) gagaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGATGTGGTGGCCAAACTTACTGCCACC‑TCTTCGGTGACCGAAGGCGTTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGAt < 8:291449/149‑1 (MQ=255) gagaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGAc < 4:184226/138‑1 (MQ=255) gagaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGAc > 3:184226/1‑138 (MQ=255) gagaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGa < 2:100729/148‑1 (MQ=255) agaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGAt > 4:35356/1‑148 (MQ=255) gCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAAc < 1:200143/147‑1 (MQ=255) gCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCa > 2:3030/1‑149 (MQ=255) gggTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTc < 6:122131/147‑1 (MQ=255) gggggCCCGGCTACCGTTGAGATCTCGTACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCTCC‑CCTTCGGTGACAGAAGGCTTTGAGATCACCTACACCATCACCCTGACCACCAAAGAGGGTCTGCGGATCTATAAGCTCTCGGa < 6:74618/146‑1 (MQ=18) ggTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGa < 1:28785/149‑1 (MQ=255) cGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTAc < 2:133802/149‑1 (MQ=255) cGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTAc < 7:300912/149‑1 (MQ=255) ccGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGTTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCaa < 3:242239/148‑1 (MQ=255) ccGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAg < 3:159565/149‑1 (MQ=255) gTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCt > 3:192992/1‑149 (MQ=255) tcGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATg > 8:136678/1‑148 (MQ=255) ggACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGGCCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCa > 3:269835/1‑149 (MQ=255) ggACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGAt < 3:178579/145‑1 (MQ=255) gACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGGCCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCac < 4:269835/149‑1 (MQ=255) cacTATCAGTGAAGTGGTGGCCAAACTGACTGCCAGC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATGACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCacta < 5:243268/149‑1 (MQ=255) tATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGa > 7:190666/1‑134 (MQ=38) tATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGa < 8:190666/134‑1 (MQ=38) tATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATgg < 6:305763/141‑1 (MQ=40) tATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATgg > 5:305763/1‑141 (MQ=40) tATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTg > 4:52172/1‑149 (MQ=255) gTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGAACGAAGGCGGTGAGATCACCTACACAATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGATGTACATCAAGCTGACCGATGGCACTACTgtcgtc > 2:239735/1‑149 (MQ=255) aaGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACTGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTcgtcgt < 8:37123/148‑1 (MQ=37) aaGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTcgtcgt < 3:35356/148‑1 (MQ=37) gCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCaa > 3:233086/1‑149 (MQ=37) cAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑Gc < 6:4377/141‑1 (MQ=37) cAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑Gc > 5:4377/1‑141 (MQ=37) tgCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCg > 4:98461/1‑149 (MQ=35) caccgccTTCGGTCACCGAAGG‑GGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGt > 7:171780/6‑148 (MQ=255) caccgccTTCGGTCACCGAAGG‑GGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGt < 8:171780/143‑1 (MQ=255) accgccTTCGGTCACCGAAGG‑GGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTc > 2:55650/5‑149 (MQ=255) aCC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAAGCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTc > 1:104059/1‑149 (MQ=21) cc‑ccTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTCg < 4:233086/149‑1 (MQ=34) ccacTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTCg < 8:131035/146‑1 (MQ=21) cTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGCGCAGCCAACAGCACCACCGGTTCGGc < 1:3030/149‑1 (MQ=21) cTTCGGTGACCGAAGGCGGTGAGATCACCTACACAATCACCCTGACCAACAAAGAAGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTCGGc > 4:179487/1‑148 (MQ=21) tGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTCGGCCACTGTa < 7:136678/149‑1 (MQ=34) tGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTCGGCCACTGTa < 4:192992/149‑1 (MQ=34) | GCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACC‑CCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTG‑GCAGCCAACAGCACCACCGGTTCGGCCACTGTA > NC_002947/198224‑198514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |