| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,911,553 | G→C | 7.4% | L149L (CTG→CTC) | PP_1711 → | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,911,553 | 0 | G | C | 7.4% | 236.6 / 4.9 | 77 | L149L (CTG→CTC) | PP_1711 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (42/29); new base C (2/4); total (44/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGCGACCCGATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCTCAGCCGCCGCGCCGCGCTGG > NC_002947/1911408‑1911698 | ccTGCGACCCGATGGACCTGGAGGAAGGGGCGCGCCTGCAGGCGCCGGAGCTGTCGCCGTTCAGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCTAGCGCACGCATGC‑GCTCGag < 4:248546/149‑2 (MQ=255) cTGCGACCCGATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATg > 7:225000/1‑149 (MQ=255) cGACCCGATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGGCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACGTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCTCACGCATGC‑GCTCGaggg < 6:187741/147‑4 (MQ=255) cGACCCGATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGCTAGTTTTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCACGCATGC‑GCTCGaggg < 1:275274/147‑4 (MQ=255) cGACCCGATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGc < 8:116369/147‑1 (MQ=255) ccGATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAAccg > 3:270334/1‑149 (MQ=255) gATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAAccgcc > 3:29745/1‑149 (MQ=255) ccTGGAGGAAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCg < 7:121656/149‑1 (MQ=255) gaggaAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCAc < 3:302518/149‑1 (MQ=255) gtgtCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCcgcg > 2:197152/1‑148 (MQ=255) tCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAAt > 5:185423/1‑149 (MQ=255) gATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATcc > 4:52140/1‑149 (MQ=255) aTCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCt > 2:28735/1‑149 (MQ=255) tCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTc < 4:29745/149‑1 (MQ=255) tGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCa > 5:142511/1‑147 (MQ=255) tGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCa > 5:158781/1‑147 (MQ=255) tGCAGGCGCCGGAGCTGTCGCCCTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCa > 7:255606/1‑147 (MQ=255) gcgcCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCt > 4:33528/1‑149 (MQ=255) gcCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCACAGGCCTGt > 4:45874/1‑149 (MQ=255) cGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTGGGCACCCGCGAAATCCTCAAAGGCCTGTtg < 1:28735/149‑1 (MQ=255) tCGCGGTTCCGCTTTCTGGAGCATCTCTACTTCCACCTGAGTGACCCGTACTTTGCCTTGTTACTACAAACCCTCTAGCGTATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGc < 1:102611/148‑1 (MQ=255) gCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTg > 8:288476/1‑148 (MQ=255) gCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGa < 6:142511/149‑1 (MQ=255) gCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCACGCATGC‑GCTCGa > 7:228846/1‑93 (MQ=255) gCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCACGCATGC‑GCTCGa < 8:228846/93‑1 (MQ=255) ccGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCa < 8:129354/127‑1 (MQ=255) ccGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCa > 7:129354/1‑127 (MQ=255) ttCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCgg > 5:333585/1‑149 (MQ=255) gCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTAAAAGGCCTGTTGCTGCAGCTGATCGGCCAg < 1:197152/149‑1 (MQ=255) tttCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACATACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGt < 8:225000/149‑1 (MQ=255) tttCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGt > 4:290436/1‑149 (MQ=255) aGGAGCATCTCGACTTCCACCTGAGTGACCCGGTCTTTTCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCtgt < 3:88933/149‑1 (MQ=255) gAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGc < 2:242549/130‑1 (MQ=255) gAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGc < 2:246875/130‑1 (MQ=255) gAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGc > 1:246875/1‑130 (MQ=255) gAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGc > 1:242549/1‑130 (MQ=255) aTCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTg < 6:185423/149‑1 (MQ=255) cGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATg > 8:102601/1‑149 (MQ=255) gACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTTATCGGCCAGGTCTGTGGCCTGTATg < 3:33528/148‑1 (MQ=255) gACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTAt < 3:290436/147‑1 (MQ=255) gACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTAt < 4:270334/147‑1 (MQ=255) tCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCa < 6:6931/127‑1 (MQ=255) tCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCa > 5:6931/1‑127 (MQ=255) tCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAg > 3:270808/1‑149 (MQ=255) tCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTCGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAg > 3:266314/1‑149 (MQ=255) cACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAg < 2:75451/126‑1 (MQ=255) cACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAg > 1:75451/1‑126 (MQ=255) cTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCt > 3:10365/1‑149 (MQ=255) cTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCt > 6:151851/1‑149 (MQ=255) gAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTgc > 2:46486/1‑149 (MQ=255) aGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTAAGCCGAGCCGCTgc < 3:52140/148‑1 (MQ=255) tGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTgcgc > 4:216091/1‑148 (MQ=255) tGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGcgcg < 4:10365/149‑1 (MQ=255) gACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGcgcg > 1:15520/1‑148 (MQ=255) aCCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGaa > 3:1764/1‑149 (MQ=255) ccGGACTTTGCCGAGGTACGAAAAACCCTCGAGCGCATGCGTGA‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCAAGGTCTGTGGc > 1:276331/1‑123 (MQ=255) gACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGc > 2:157450/1‑149 (MQ=255) tttGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAAc < 2:154608/142‑1 (MQ=255) tttGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAAc > 1:154608/1‑142 (MQ=255) tGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGa < 6:158781/147‑1 (MQ=255) gTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAg < 2:220077/87‑1 (MQ=255) gTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAg > 1:220077/1‑87 (MQ=255) gTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAAcgc > 1:223246/1‑149 (MQ=255) tACGACAAACCCTCGAGCGCATGCGTGCGGCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAAcgc > 1:24948/1‑149 (MQ=255) aCGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGTCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCgg > 4:105422/1‑149 (MQ=255) cGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCgg < 6:333585/148‑1 (MQ=255) cGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCgg < 4:1764/148‑1 (MQ=255) gACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTc < 1:92792/65‑1 (MQ=255) gACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTc > 2:92792/1‑65 (MQ=255) aCAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGcc > 6:262826/1‑148 (MQ=255) aCCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCt < 2:223246/149‑1 (MQ=255) ccTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCt > 8:131741/1‑147 (MQ=255) ccTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCTCa > 2:293050/1‑149 (MQ=255) ccTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCATGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACTCGGCCCAGCt > 2:293051/1‑147 (MQ=255) gcgtgc‑gCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCTCAGCcgccgcgccg > 7:179408/1‑149 (MQ=255) tgc‑gCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCTCAGCCGCcgcgccgcgc > 5:313953/1‑149 (MQ=255) gcTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCTCAGCCGCCGCGCCGCGCTgg < 2:24948/149‑1 (MQ=255) | CCTGCGACCCGATGGACCTGGAGGAAGTGTCGATCCTGCAGGCGCCGGAGCTGTCGCCGTTCCGCTTTCAGGAGCATCTCGACTTCCACCTGAGTGACCCGGACTTTGCCGAGGTACGACAAACCCTCGAGCGCATGCGTGC‑GCTGGATGCCAACCGCCGTTTCGGCACCCGCGAAATCCTCAAAGGCCTGTTGCTGCAGCTGATCGGCCAGGTCTGTGGCCTGTATGCCGAGCCGCTGCGCGAACTGGCCGACAGCAACGCGGCCCAGCTCAGCCGCCGCGCCGCGCTGG > NC_002947/1911408‑1911698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |