Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,939,121 G→T 6.4% intergenic (‑66/‑113) PP_1738 ← / → PP_1739 hypothetical protein/membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,939,1210GT 6.4% 199.8 / 4.0 62intergenic (‑66/‑113)PP_1738/PP_1739hypothetical protein/membrane protein
Reads supporting (aligned to +/- strand):  ref base G (29/29);  new base T (2/2);  total (31/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01

GTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACGG  >  NC_002947/1938978‑1939267
                                                                                                                                               |                                                                                                                                                   
gTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGcc                                                                                                                                                >  5:273849/1‑149 (MQ=255)
  cGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCg                                                                                                                                              >  4:45122/1‑149 (MQ=255)
   gATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGGAAAGTTGCCCGc                                                                                                                                             >  1:108439/1‑149 (MQ=255)
   gATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGc                                                                                                                                             >  5:174563/1‑149 (MQ=255)
         ccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt                                                                                                                                       >  3:105973/1‑149 (MQ=255)
           gcgcTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGCTgg                                                                                                                                     >  4:34305/1‑149 (MQ=255)
               tGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCAtt                                                                                                                                 >  1:309692/1‑149 (MQ=255)
                         acaGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGACCGCTGAGGTGGCATTTGGCGTACtt                                                                                                                       >  6:53046/1‑149 (MQ=255)
                          caGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTg                                                                                                                      <  2:309692/149‑1 (MQ=255)
                            gCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCt                                                                                                                    <  2:11767/149‑1 (MQ=255)
                            gCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCt                                                                                                                    <  6:3063/149‑1 (MQ=255)
                             ccATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTa                                                                                                                   <  3:45122/149‑1 (MQ=255)
                              cATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTAt                                                                                                                  >  4:147428/1‑149 (MQ=255)
                                      aGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACa                                                                                                         >  1:300941/1‑149 (MQ=255)
                                       gCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAg                                                                                                                                                     >  4:79665/1‑105 (MQ=255)
                                       gCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAg                                                                                                                                                     <  3:79665/105‑1 (MQ=255)
                                         tGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAATGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAg                                                                                                      >  2:191520/1‑149 (MQ=255)
                                         tGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAACTTTGc                                                                                                                                                 <  6:64564/107‑1 (MQ=255)
                                         tGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAACTTTGc                                                                                                                                                 >  5:64564/1‑107 (MQ=255)
                                         tGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAg                                                                                                      >  2:228321/1‑149 (MQ=255)
                                             gAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGAAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGGAGGCTACGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCATCATAGCTGc                                                                                                  >  4:115895/1‑149 (MQ=255)
                                              aGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGcc                                                                                                 >  6:128260/1‑149 (MQ=255)
                                               gCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCg                                                                                                <  6:273849/149‑1 (MQ=255)
                                                   ggCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGgt                                                                                            >  3:182212/1‑149 (MQ=255)
                                                   ggCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGgt                                                                                            <  1:228321/149‑1 (MQ=255)
                                                           ggCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAATGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGAtttt                                                                                    <  1:191520/149‑1 (MQ=255)
                                                           ggCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGAtttt                                                                                    <  3:147428/149‑1 (MQ=255)
                                                              gcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGcc                                                                                 <  6:174563/149‑1 (MQ=255)
                                                                 aatttCGAATCATTTAATCTCCCAAAAGAACGCAAGTTCGAGCAGTGTGCAGGCTAGGACCACAACCATGCGGTCAAAGTTGACCGCTGCGGTGGGATTTGGCTTACTTTCTATCTGCAACATAGCTGCCGGTTTGTGATTTTGCCTTa                                                                              <  6:320123/145‑1 (MQ=255)
                                                                 aaGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTa                                                                              <  2:300941/149‑1 (MQ=255)
                                                                 aaGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTa                                                                              <  4:182212/149‑1 (MQ=255)
                                                                   gATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGa                                                                            <  2:157185/149‑1 (MQ=255)
                                                                        aaGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg                                                                       >  6:59308/1‑149 (MQ=255)
                                                                         aGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACggg                                                                      <  4:322400/149‑1 (MQ=255)
                                                                               tAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATaa                                                                 <  4:105973/148‑1 (MQ=255)
                                                                                     cccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCa                                                          >  8:285422/1‑149 (MQ=255)
                                                                                      ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGAtttt                                                                                    <  6:35254/122‑1 (MQ=255)
                                                                                      ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGAtttt                                                                                    >  5:35254/1‑122 (MQ=255)
                                                                                      ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCa                                                          >  6:8514/1‑148 (MQ=255)
                                                                                      ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCa                                                          <  5:8514/148‑1 (MQ=255)
                                                                                      ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCAt                                                         >  4:207044/1‑149 (MQ=255)
                                                                                      ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCAt                                                         <  5:128260/149‑1 (MQ=255)
                                                                                        aaaaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt                                                                                                                                       >  2:232050/1‑70 (MQ=255)
                                                                                        aaaaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGc                                                               <  1:124814/141‑1 (MQ=255)
                                                                                        aaaaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGc                                                               >  2:124814/1‑141 (MQ=255)
                                                                                        aaaaGAACGCAAGGTCGAGCAGTGAGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt                                                                                                                                       <  1:232050/70‑1 (MQ=255)
                                                                                         aaaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTTGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGa                                                      <  5:53046/149‑1 (MQ=255)
                                                                                                      tCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTAc                                         <  5:43231/149‑1 (MQ=255)
                                                                                                             gtgtGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTAtt                                  >  7:4701/1‑149 (MQ=255)
                                                                                                                tgCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAAc                                                                         >  5:89395/1‑107 (MQ=255)
                                                                                                                tgCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAAc                                                                         <  6:89395/107‑1 (MQ=255)
                                                                                                                     gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGgtgt                                                                                          <  6:104785/85‑1 (MQ=255)
                                                                                                                     gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGgtgt                                                                                          >  5:104785/1‑85 (MQ=255)
                                                                                                                     gCTAGGACCACAACCAGGCGGGCAAAGGTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTTTGATTTTGCCTTAGAAACGGGCATAAGCGAGCATGGATGCTTTCGATTACCGCTATTGGAGAAc                           <  3:45548/148‑1 (MQ=255)
                                                                                                                           aCCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTc                                               >  2:184573/1‑122 (MQ=255)
                                                                                                                           aCCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTc                                               <  1:184573/122‑1 (MQ=255)
                                                                                                                           aCCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGt                    <  3:207044/149‑1 (MQ=255)
                                                                                                                             cacaACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGtct                  >  4:226826/1‑149 (MQ=255)
                                                                                                                             cacaACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGtct                  <  3:226826/149‑1 (MQ=255)
                                                                                                                                aaCCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGt               >  1:150016/1‑149 (MQ=255)
                                                                                                                                   gcagctggCAACTTTGCCCGGTGCGGTGGGATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGCGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGAt                      <  4:120990/133‑1 (MQ=255)
                                                                                                                                   gcagCGGGCAACTTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGGTTTCGATTACCGCTATTGGAGAACAGGAt                      >  3:120990/4‑139 (MQ=255)
                                                                                                                                           cAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAAACATAGCTGCCGGGGTGTCATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGa     >  1:73777/1‑149 (MQ=255)
                                                                                                                                             aaGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACgg  <  7:285422/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
GTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACGG  >  NC_002947/1938978‑1939267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: