Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,942,105 T→A 6.8% V216E (GTA→GAA)  betX → choline/betaine/carnitine ABC transporter substrate‑binding protein BetX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,942,1050TA 6.8% 175.6 / 3.1 59V216E (GTA→GAA) betXcholine/betaine/carnitine ABC transporter substrate‑binding protein BetX
Reads supporting (aligned to +/- strand):  ref base T (28/27);  new base A (2/2);  total (30/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.42e-01

AAGTTGCAGGCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGG  >  NC_002947/1941960‑1942247
                                                                                                                                                 |                                                                                                                                              
aaGTTGCAGGCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGtata                                                                                                                                             >  1:173623/1‑149 (MQ=255)
     gCAGGCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGCCCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGgcg                                                                                                                                        >  8:155046/1‑149 (MQ=255)
     gCAGGCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGgcg                                                                                                                                        >  7:116389/1‑149 (MQ=255)
     gCAGGCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGgc                                                                                                                                         <  7:37803/148‑1 (MQ=255)
       aGGCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGcgcg                                                                                                                                      <  8:219654/149‑1 (MQ=255)
         gCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGtat                                                                                                                                              <  3:37875/139‑1 (MQ=255)
         gCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGtat                                                                                                                                              >  4:37875/1‑139 (MQ=255)
         gCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCgg                                                                                                                                     >  6:234808/1‑148 (MQ=255)
         gCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCgg                                                                                                                                     >  5:38203/1‑148 (MQ=255)
           cAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCgg                                                                                                                                     >  8:239374/1‑146 (MQ=255)
                 gggTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAAc                                                                                                                              <  3:77760/147‑1 (MQ=255)
                       ggcgATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACa                                                                                                                      <  5:153971/149‑1 (MQ=255)
                                tGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCgg                                                                                                               >  5:305870/1‑147 (MQ=255)
                                        tGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGAACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGaa                                                                                                     >  5:163562/1‑149 (MQ=255)
                                             cGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGc                                                                                                <  8:116389/149‑1 (MQ=255)
                                               tGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAAc                                                                                                    >  6:43977/1‑143 (MQ=255)
                                               tGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAAc                                                                                                    <  5:43977/143‑1 (MQ=255)
                                                     tGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAgg                                                                                        <  2:173623/149‑1 (MQ=255)
                                                         aaGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCAcc                                                                                    <  2:272071/149‑1 (MQ=255)
                                                                           gTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCt                                                                  <  7:133564/149‑1 (MQ=255)
                                                                            tGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTg                                                                 <  3:106082/149‑1 (MQ=255)
                                                                                  gCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGaagaag                                                           >  3:222931/1‑149 (MQ=255)
                                                                                       gTTCCGCACTTGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCaa                                                      <  7:239374/149‑1 (MQ=255)
                                                                                       gTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCaa                                                      >  2:63270/1‑149 (MQ=255)
                                                                                        ttCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAAc                                                     <  7:155046/149‑1 (MQ=255)
                                                                                           cGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTgg                                                  >  2:197333/1‑149 (MQ=255)
                                                                                           cGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTg                                                   >  6:110946/1‑148 (MQ=255)
                                                                                           cGCACTGGATGATCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACACGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTgg                                                  <  6:163562/149‑1 (MQ=255)
                                                                                            gCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAgg                                                                                        <  4:205379/110‑1 (MQ=255)
                                                                                            gCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAgg                                                                                        >  3:205379/1‑110 (MQ=255)
                                                                                            gCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTgg                                                  >  2:64487/1‑148 (MQ=255)
                                                                                             cACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTgg                                                  >  4:157983/1‑147 (MQ=255)
                                                                                                tGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCg                                                                          <  6:176036/120‑1 (MQ=255)
                                                                                                tGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCg                                                                          >  5:176036/1‑120 (MQ=255)
                                                                                                  gATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTcc                                            >  7:48238/1‑148 (MQ=255)
                                                                                                     gTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAg                                         >  6:178331/1‑148 (MQ=255)
                                                                                                      ttCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGa                                       >  4:224103/1‑149 (MQ=255)
                                                                                                       tCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGAc                                      >  1:86311/1‑149 (MQ=255)
                                                                                                           cAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTcc                                                                   >  7:159328/1‑116 (MQ=255)
                                                                                                           cAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTcc                                                                   <  8:159328/116‑1 (MQ=255)
                                                                                                              gTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTg                               <  5:234808/149‑1 (MQ=255)
                                                                                                                    gCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAgg                         >  3:235230/1‑149 (MQ=255)
                                                                                                                     cTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAAc                                                     >  4:220992/1‑120 (MQ=255)
                                                                                                                     cTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAAc                                                     <  3:220992/120‑1 (MQ=255)
                                                                                                                          gTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGc                   <  6:305870/149‑1 (MQ=255)
                                                                                                                           ttCCTCGAAGACCCGAAAGGCGAATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTgaagaa                                                            <  4:290634/107‑1 (MQ=255)
                                                                                                                           ttCCTCGAAGACCCGAAAGGCGAATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTgaagaa                                                            <  4:285847/107‑1 (MQ=255)
                                                                                                                           ttCCTCGAAGACCCGAAAGGCGAATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTgaagaa                                                            >  3:290634/1‑107 (MQ=255)
                                                                                                                           ttCCTCGAAGACCCGAAAGGCGAATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTgaagaa                                                            >  3:285847/1‑107 (MQ=255)
                                                                                                                              ctctAAGACCCTAAAGGCTTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGTAACTGGCAACCAAGGCACGGGAAGTGGGGTAGTTCCTTAATAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTgg                <  1:64487/148‑1 (MQ=255)
                                                                                                                              cTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTgg                <  4:222931/148‑1 (MQ=255)
                                                                                                                              cTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTgg                <  1:197333/148‑1 (MQ=255)
                                                                                                                               tCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAg                                         <  2:109979/122‑1 (MQ=255)
                                                                                                                               tCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAg                                         >  1:109979/1‑122 (MQ=255)
                                                                                                                               tCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTg                 <  1:134912/146‑1 (MQ=255)
                                                                                                                               tCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTg                 >  2:134912/1‑146 (MQ=255)
                                                                                                                                 gAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCTTCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGAt            >  1:233232/1‑149 (MQ=255)
                                                                                                                                       ccGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACgag                                   <  2:316535/120‑1 (MQ=255)
                                                                                                                                       ccGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACgag                                   >  1:316535/1‑120 (MQ=255)
                                                                                                                                       ccGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAgg       >  7:103042/1‑148 (MQ=255)
                                                                                                                                         gAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAg    <  5:110946/149‑1 (MQ=255)
                                                                                                                                           aaGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAggg  <  8:48238/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                              
AAGTTGCAGGCCAGCTCGGGTGCGGCGATGACTGCGGAACTGGGCCGTGCCTATGCCAAGCAGCAGTCGATTGCGGTGACCGGCTGGGTTCCGCACTGGATGTTCGCCAAGTGGAAGCTGAAGTTCCTCGAAGACCCGAAAGGCGTATATGGCGCGGCAGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCCACCAAGGCACCGGAAGTGGCGGAGTTCCTGAAGAAGTTCAACTGGCAGTCCAAGGACGAGATTGGCGAGGTGATGCTGGCGATCCAGGAAGGG  >  NC_002947/1941960‑1942247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: