Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,081,112 G→T 6.2% intergenic (+30/+85) efp → / ← ohr elongation factor P/organic hydroperoxide resistance protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,081,1120GT 6.2% 205.1 / 3.3 65intergenic (+30/+85)efp/ohrelongation factor P/organic hydroperoxide resistance protein
Reads supporting (aligned to +/- strand):  ref base G (29/32);  new base T (2/2);  total (31/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.73e-01

GAAGCCTGCCAAGCTGGCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGTGTGGCATTGGAGTACGGG  >  NC_002947/2080965‑2081254
                                                                                                                                                    |                                                                                                                                              
gAAGCCTGCCAAGCTGGCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGgcg                                                                                                                                                >  7:159833/1‑148 (MQ=255)
 aaGCCTGCCAAGCTGGCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGgcgc                                                                                                                                               >  2:225366/1‑148 (MQ=255)
        ccAAGCTGGCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCggg                                                                                                                                       >  6:65261/1‑149 (MQ=255)
        ccAAGCTGGCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCg                                                                                                                                         <  8:155190/147‑1 (MQ=255)
               ggCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTtg                                                                                                                                >  6:195245/1‑149 (MQ=255)
                gCGAACGGTACGGAGATCTCGGTTGCCGACTTCATCCAGAGCGTCGTGTGGATCGACATCGTCACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGTCGCAAAAAA‑CCCGGCGCAAGCCGGGtttttt                                                                                                                                 <  4:293012/147‑1 (MQ=255)
                gCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCTTGCGCCGGGtttttt                                                                                                                                 <  5:187619/147‑1 (MQ=255)
                gCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCACGCCGGGtttttt                                                                                                                                 <  5:91871/147‑1 (MQ=255)
                  gAACGGTACCGAGAGCTCGGTTGCCGACTTCATCCAGATCGACGACTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGc                                                                                                                             <  5:127013/149‑1 (MQ=255)
                   aaCGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTTCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGcc                                                                                                                            >  6:39212/1‑149 (MQ=255)
                           cGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCgg                                                                                                                                        >  8:53371/1‑129 (MQ=255)
                           cGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCgg                                                                                                                                        <  7:53371/129‑1 (MQ=255)
                           cGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCGTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGtttt                                                                                                                    >  3:170125/1‑149 (MQ=255)
                            gagaTCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTc                                                                                                                   >  6:22878/1‑149 (MQ=255)
                             agaTCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTcc                                                                                                                  <  2:40271/149‑1 (MQ=255)
                              gaTCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAACCCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTcc                                                                                                                  <  1:225366/149‑1 (MQ=255)
                              gaTCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTcc                                                                                                                  >  3:264028/1‑148 (MQ=255)
                                 ctcGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCaa                                                                                                                                             >  8:4244/1‑118 (MQ=255)
                                 ctcGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAAt                                                                                                              <  8:159833/149‑1 (MQ=255)
                                    ggTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAAt                                                                                                              <  4:98357/146‑1 (MQ=255)
                                            aCTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTTCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGt                                                                                                   <  5:39212/149‑1 (MQ=255)
                                            aCTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGt                                                                                                   <  7:77819/149‑1 (MQ=255)
                                               tCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCt                                                                                                >  4:189041/1‑149 (MQ=255)
                                                 aTCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGGTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCtt                                                                                               <  3:304117/148‑1 (MQ=255)
                                                  tCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTtgtg                                                                                                                              >  2:151877/1‑116 (MQ=255)
                                                      gATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTc                                                                                         >  3:104492/1‑149 (MQ=255)
                                                            cgaGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAg                                                                                   <  4:264028/149‑1 (MQ=255)
                                                                   atcgacatcgacACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATcg                                                                            <  5:65261/149‑1 (MQ=255)
                                                                        catcgacaCTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCaa                                                                       <  2:308774/149‑1 (MQ=255)
                                                                        catcgacaCTCCCGACAACATCTTCAACCGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCaa                                                                       <  8:291344/149‑1 (MQ=255)
                                                                        catcgacaATCCCGACAACAGCTTCAAAGGCCTCTCCATCAAGTAATGCTTCTTGCGAGACTCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGAGCCTGTGTTTTCCCAATCCTCAGCGCGTGCGTGTGCTCCCACAGGGGATCGCGCaa                                                                       <  3:46195/149‑1 (MQ=255)
                                                                            gacaCTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCt                                                                   >  8:276672/1‑149 (MQ=255)
                                                                              cacTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCttt                                                                 <  5:22878/149‑1 (MQ=255)
                                                                               acTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTg                                                                >  4:132645/1‑149 (MQ=255)
                                                                                 tCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTgcg                                                              >  8:108544/1‑149 (MQ=255)
                                                                                  cgcgACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAAt                                                                                                              >  3:302593/1‑100 (MQ=255)
                                                                                  cgcgACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAAt                                                                                                              <  4:302593/100‑1 (MQ=255)
                                                                                    cgACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCt                                                           <  7:108544/149‑1 (MQ=255)
                                                                                     gACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCtt                                                          <  5:98037/149‑1 (MQ=255)
                                                                                           aGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACgg                                                    <  7:276672/149‑1 (MQ=255)
                                                                                             cTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGt                                                   >  4:296369/1‑148 (MQ=255)
                                                                                             cTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCAGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCCTGCTTCTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGt                                                   >  2:264014/1‑148 (MQ=255)
                                                                                                   aGGCCGCTCCAAGTAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGc                                            <  3:233826/149‑1 (MQ=255)
                                                                                                     gCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTAAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAg                                          >  8:186719/1‑149 (MQ=255)
                                                                                                      ccGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAgg                                         >  6:112849/1‑149 (MQ=255)
                                                                                                       cGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGgc                                        <  5:195245/149‑1 (MQ=255)
                                                                                                         cTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGgcgc                                      <  3:102838/149‑1 (MQ=255)
                                                                                                         cTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGgcg                                       >  7:96042/1‑148 (MQ=255)
                                                                                                          tCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGca                                     >  6:212906/1‑149 (MQ=255)
                                                                                                          tCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGca                                     >  6:63150/1‑149 (MQ=255)
                                                                                                            cAAGAAGCATTACTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGcaca                                   >  3:109648/1‑149 (MQ=255)
                                                                                                             aagaagTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACAt                                  >  5:282777/1‑149 (MQ=255)
                                                                                                              agaagTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGgc                                        >  6:316733/1‑142 (MQ=255)
                                                                                                              agaagTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGgc                                        <  5:316733/142‑1 (MQ=255)
                                                                                                                     aTGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGTCGCACATCCACAtt                           >  8:185492/1‑148 (MQ=255)
                                                                                                                       gCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTAcc                        >  2:135330/1‑149 (MQ=255)
                                                                                                                        cttcttGCGATACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTAcc                        <  3:189041/148‑1 (MQ=255)
                                                                                                                               ggagaCGCAAAAAA‑CCCGGCGCATGCGGGGTTTTTTGGGCGTGGGTTTTCCCAATCTTCAGCGGGGGGTTGTGGTCCAACTGGTTCTCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGtgtg                 <  1:264014/147‑1 (MQ=255)
                                                                                                                                   gcacAAAAAA‑CCCGGCTTGCGCCGGGTTTTTTGCGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTAc                                                <  3:126666/110‑1 (MQ=38)
                                                                                                                                   gcacAAAAAA‑CCCGGCTTGCGCCGGGTTTTTTGCGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTAc                                                >  4:126666/4‑113 (MQ=38)
                                                                                                                                    cGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACATGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGTGTGGCATTg           >  2:84281/1‑149 (MQ=255)
                                                                                                                                      cAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGTGTGGCATTGGa         <  7:186719/149‑1 (MQ=255)
                                                                                                                                      cAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGTGTGGCATTGGa         <  1:135330/149‑1 (MQ=255)
                                                                                                                                       aaaaaa‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTAACGTGCAGGCGCACATCCACATTACCGCGAGTGGAATTg           >  8:116978/1‑146 (MQ=255)
                                                                                                                                          aaa‑CCCGGCTTGCGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGTGTGGCATTGGAGTAc     >  4:182691/1‑149 (MQ=255)
                                                                                                                                           aa‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGTGTGGCATTGGAGTACg    <  4:109648/149‑1 (MQ=255)
                                                                                                                                              cccGGCGCAAGCCGGGTTTTTTGTGCCTGTGTCTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGCTTACGTGCAGGCGCACATCCACATTCCCGCGTGTGCCATACGACTACggg  <  4:170125/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
GAAGCCTGCCAAGCTGGCGAACGGTACCGAGATCTCGGTTGCCGACTTCATCCAGATCGACGAGTGGATCGACATCGACACTCGCGACAACAGCTTCAAAGGCCGCTCCAAGAAGTAATGCTTCTTGCGAGACGCAAAAAA‑CCCGGCGCAAGCCGGGTTTTTTGTGCCTGTGTTTTCCCAATCCTCAGCGCGTGCTTGTGCTCCCACAGGGGATCGCGCAAGCCTTTGCGCCTTAGACGGTTACGTGCAGGCGCACATCCACATTACCGCGTGTGGCATTGGAGTACGGG  >  NC_002947/2080965‑2081254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑