| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,301,427 | G→C | 5.5% | intergenic (‑71/‑260) | sbcD ← / → PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,301,427 | 0 | G | C | 5.5% | 357.6 / 8.2 | 110 | intergenic (‑71/‑260) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (48/56); new base C (3/3); total (51/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.09e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GGCGTGTTCGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCC > NC_002947/2301282‑2301571 | ggCGTGTTCGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGc > 8:29985/1‑149 (MQ=255) gCGTGTTCGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCg > 1:101490/1‑149 (MQ=255) gCGTGTTCGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCg > 1:139321/1‑149 (MQ=255) cGTGTTCGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCgg < 2:113207/149‑1 (MQ=255) ttCGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGccc > 2:113406/1‑148 (MQ=255) cGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAATGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGAt > 4:250140/1‑149 (MQ=255) cGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGAt > 5:70319/1‑149 (MQ=255) gAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGAt < 5:291127/148‑1 (MQ=255) gAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATc > 6:174211/1‑149 (MQ=255) gAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCACAGCGGccccac < 7:143447/148‑4 (MQ=255) gAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCACAGCGGccccac < 4:80336/148‑4 (MQ=255) aaGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATcg > 7:192369/1‑149 (MQ=255) gTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATcgcg > 5:305869/1‑149 (MQ=255) tCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCgg < 2:23266/149‑1 (MQ=255) gcgTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCg < 6:18751/135‑1 (MQ=255) gcgTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCg > 5:18751/1‑135 (MQ=255) gcgTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCggg > 5:277853/1‑148 (MQ=255) gcgTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCggg > 1:87651/1‑148 (MQ=255) gcgTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGAAGCATGGATGACCTGTTGGTGTCGAGTCGTGCAAGCGGGGAAAGGGCGGGATGGTAACCCAAGC‑GTGGGGCCGCAGTGCGGCCCGATAGCtgg > 3:201197/1‑148 (MQ=255) gTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAATGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCaa < 3:250140/149‑1 (MQ=255) gTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGc > 3:139915/1‑147 (MQ=255) tCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAg > 4:95552/1‑148 (MQ=255) ccTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGc < 8:192369/148‑1 (MQ=255) cTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGcc < 1:232834/148‑1 (MQ=255) cTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGc > 6:912/1‑147 (MQ=255) cTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCa < 2:139321/149‑1 (MQ=255) tGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtcta > 5:16609‑M1/1‑145 (MQ=255) cAGGCTTTTGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatc < 2:297896‑M1/149‑7 (MQ=255) cAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCaa > 6:278662/1‑136 (MQ=255) cAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCa > 1:155942/1‑140 (MQ=255) cAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCa < 2:155942/140‑1 (MQ=255) gCTTTGGCCGAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCCCTGTGCGTCCCGATCACGGGCAAGCCAGCTtcaatcaa > 2:296576‑M1/1‑140 (MQ=255) gCTTTGGCCCATGTCCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGCGCGGTATGGTAACCCAAGC‑GTGCGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaa < 3:91092‑M1/149‑10 (MQ=255) gCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaa < 3:95552‑M1/149‑10 (MQ=255) gtcccagGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGTCTTTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaa < 5:326155‑M1/146‑14 (MQ=255) aGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataa < 5:174211‑M1/149‑20 (MQ=255) tGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacc < 7:29985‑M1/148‑22 (MQ=255) aGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCACAGCGGcccca > 6:183707/1‑104 (MQ=255) aGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCACAGCGGcccca < 5:183707/106‑3 (MQ=255) gTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgt > 3:150082‑M1/1‑122 (MQ=255) gTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgt > 7:34580‑M1/1‑122 (MQ=255) tCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgtt > 5:68763‑M1/1‑121 (MQ=255) ggAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttc < 2:87651‑M1/148‑30 (MQ=255) aGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttcttt < 5:127348‑M1/149‑33 (MQ=255) tATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttcta < 4:140758‑M1/149‑36 (MQ=255) gAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagc < 2:101490‑M1/148‑38 (MQ=255) aaaCAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcg < 6:68763‑M1/148‑39 (MQ=255) aaCAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcga > 4:161751‑M1/1‑109 (MQ=255) aaCAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttc < 4:240599‑M1/142‑34 (MQ=255) aaCAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttc > 3:240599‑M1/1‑109 (MQ=255) aGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaa < 3:161751‑M1/149‑44 (MQ=255) cGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaac < 4:158232‑M1/149‑47 (MQ=255) aCCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgg < 5:912‑M1/149‑57 (MQ=255) ccTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggg < 6:277853‑M1/149‑58 (MQ=255) ccTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggg > 2:247054‑M1/1‑92 (MQ=255) cTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgggg > 3:320010‑M1/1‑91 (MQ=255) tGTTGGTGTCGAGTCGGGCAAGCCGGGAAAGGGCCCTATGGTAAACCAAGC‑GTGGGGCCGCTGTGCCGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagaaaacccactgttctttataccgaaaaaaacaggcccgcggggt > 6:311834‑M1/1‑90 (MQ=255) ttGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtc > 2:99643‑M1/1‑88 (MQ=255) gtgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggc > 2:199274‑M1/1‑85 (MQ=255) gtgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggc < 1:199274‑M1/135‑51 (MQ=255) gtggCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaat < 6:171040‑M1/148‑64 (MQ=255) gggtcgAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCAGTGCGGACCGATCGCGGGCCAGCCAGCTtctatcaatcaaaagataacccacagttcattctagcgaaaaaaacaggcgcgcgggggcaatg > 7:277495‑M1/3‑85 (MQ=255) tgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatgg < 5:248100‑M1/149‑66 (MQ=255) tgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatgg > 3:25315‑M1/1‑84 (MQ=255) tCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttcttt < 7:297863‑M1/114‑33 (MQ=255) tCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttcttt > 8:297863‑M1/1‑82 (MQ=255) gAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggc < 4:25315‑M1/149‑70 (MQ=255) aGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggg > 5:51444‑M1/1‑79 (MQ=255) aGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggg < 6:51444‑M1/136‑58 (MQ=255) gTCGGGCAAGCGGGGAAAGGGCGGTATGGTACCCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagatgacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcga < 3:222821‑M1/149‑72 (MQ=255) tCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa < 6:70319‑M1/149‑73 (MQ=255) gggCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagt < 1:99643‑M1/149‑75 (MQ=255) gCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagatagcccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgt < 2:10042‑M1/149‑77 (MQ=255) gCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgt > 3:162437‑M1/1‑73 (MQ=255) ccaAGCGGGGAAAGGGCGGGATTGTAAACCAAGC‑GTGGGGCCTCTGTGCGTCCCGATCGCGTGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaacaacaggcgcgcggggtcaatggctgcgaagtgt < 8:244229‑M1/148‑77 (MQ=255) cAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtt < 4:150082‑M1/149‑78 (MQ=255) aaGCGGGGAAAGGGCGGTATGGTAACCCAAGCGGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCAAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtt > 1:211915‑M1/1‑72 (MQ=255) aGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaa < 6:287402‑M1/110‑41 (MQ=255) aGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaa > 5:287402‑M1/1‑70 (MQ=255) ggggAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctttcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactc > 6:130237‑M1/1‑67 (MQ=255) ggAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt > 7:5413‑M1/1‑65 (MQ=255) ggAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa > 6:304434‑M1/1‑65 (MQ=255) ggAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa < 5:304434‑M1/137‑73 (MQ=255) gAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttc < 8:303375‑M1/149‑86 (MQ=255) ggCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcga < 1:164717‑M1/98‑40 (MQ=255) gCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacg < 6:16609‑M1/149‑92 (MQ=255) ggTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGTCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtg < 8:34580‑M1/149‑94 (MQ=255) ggTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtg < 7:36373‑M1/149‑94 (MQ=255) tATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggt < 1:113406‑M1/149‑96 (MQ=255) tGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctttcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtca < 5:130237‑M1/149‑98 (MQ=255) gTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcac < 7:88263‑M1/148‑99 (MQ=255) tAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttc > 6:114362‑M1/1‑49 (MQ=255) tAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttc < 5:114362‑M1/127‑79 (MQ=255) aCCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagc < 4:16079‑M1/148‑102 (MQ=255) ccAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgatcactcttctatacgtggtcacagcaag > 2:238724‑M1/1‑45 (MQ=255) cgatcgggccgcaCAGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcatgcgg > 1:117876‑M1/6‑41 (MQ=255) gatcgggccgcACAGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtg > 2:151954‑M1/5‑40 (MQ=255) gTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggccaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgc < 1:247054‑M1/149‑111 (MQ=255) ccGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacag < 4:162437‑M1/149‑117 (MQ=255) cGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccacttttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagg < 1:296576‑M1/149‑118 (MQ=255) | GGCGTGTTCGAAGTCGCGTTCCTGGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGC‑GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCC > NC_002947/2301282‑2301571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |