| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,313,675 | A→T | 6.2% | L138Q (CTG→CAG) | benE‑I ← | benzoate transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,313,675 | 0 | A | T | 6.2% | 298.6 / 6.7 | 96 | L138Q (CTG→CAG) | benE‑I | benzoate transport protein |
| Reads supporting (aligned to +/- strand): ref base A (51/39); new base T (4/2); total (55/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.80e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGACCAAGAACGC > NC_002947/2313528‑2313823 | cccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCcagcag < 5:23161/149‑1 (MQ=255) ccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTAGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAgg > 8:235989/1‑149 (MQ=255) cagTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCcggcgg < 3:317754/149‑1 (MQ=255) tGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCTGCTGGCcggcatcctgc < 7:158274/149‑8 (MQ=255) cGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgccg > 1:139602/1‑149 (MQ=255) gACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgccgc > 8:108827/1‑149 (MQ=255) cACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATGAGCAACCCGGCGAGGCTGGTGTCGACCGACAGGCTGGCACAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCATTGCCGCCgg < 3:62398/149‑1 (MQ=255) cGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGc < 7:108827/149‑1 (MQ=255) ggCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGCCGCCAATGCCGCCGGGCa > 5:18645/1‑149 (MQ=255) aaCGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTAcg > 6:98077/1‑149 (MQ=255) aCGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTCcgc > 3:81201/1‑149 (MQ=255) gAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGcc > 3:38692/1‑149 (MQ=255) tttGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAg > 1:316659/1‑141 (MQ=255) tttGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAg < 2:316659/141‑1 (MQ=255) gAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTAcgc > 6:6113/1‑131 (MQ=255) gAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTAcgc < 5:6113/131‑1 (MQ=255) aaaGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGaa > 8:130886/1‑146 (MQ=255) aaaGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGaa < 7:130886/146‑1 (MQ=255) aaaGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCa > 2:167393/1‑149 (MQ=255) aaGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCAc > 6:7504/1‑149 (MQ=255) cacaTACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGaa < 6:329068/141‑1 (MQ=255) cacaTACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGaa > 5:329068/1‑141 (MQ=255) cacaTACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCCAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATTCCGCCGGGCACTACGCGCACCACCCGCTCGAAGCACCCg > 5:210175/1‑148 (MQ=255) acaTACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCt < 8:169024/149‑1 (MQ=255) aCGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGc > 1:55750/1‑149 (MQ=255) cGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGc < 5:7504/148‑1 (MQ=255) cGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGc < 7:102967/148‑1 (MQ=255) gCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCa > 5:184329/1‑145 (MQ=255) gCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCa < 6:184329/145‑1 (MQ=255) cggCAATCA‑CCACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCa < 8:181874/147‑1 (MQ=255) cTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCa > 5:211080/1‑111 (MQ=255) cTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCa < 6:211080/111‑1 (MQ=255) aaTCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGca > 5:135488/1‑149 (MQ=255) aTCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcac < 2:139602/149‑1 (MQ=255) aGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcaccac < 7:235989/149‑1 (MQ=255) gCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcaccac > 1:298389/1‑148 (MQ=255) gCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcaccac > 2:86028/1‑148 (MQ=255) ggCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCGGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcg‑g > 1:251605/1‑149 (MQ=255) ggCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcg‑g < 5:199155/149‑1 (MQ=255) gAGGCTGGGGTCGACAGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcg‑gcgg > 2:226494/1‑149 (MQ=255) gCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGccc > 6:240221/1‑148 (MQ=255) accgacAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTa < 6:135488/149‑1 (MQ=255) cgacAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAgg < 5:98077/149‑1 (MQ=255) gacAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAgg > 3:79185/1‑148 (MQ=255) gacAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGc < 1:86028/149‑1 (MQ=255) gCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTa > 3:209023/1‑149 (MQ=255) cTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTAt > 4:100268/1‑149 (MQ=255) cTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTAt < 1:167393/149‑1 (MQ=255) tGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACt < 7:78153/71‑1 (MQ=255) tGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGcc > 5:41161/1‑128 (MQ=255) tGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGcc < 6:41161/128‑1 (MQ=255) tGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTACGCACCTaag > 1:309285/1‑147 (MQ=255) ggCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcg‑gcg < 5:154631/124‑1 (MQ=255) ggCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcg‑gcg > 6:154631/1‑124 (MQ=255) gctaaGGCACCGATGCCGAACTGCAGGAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCACTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGc < 6:18645/146‑1 (MQ=255) gCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGc > 5:148447/1‑149 (MQ=255) aaGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTc < 4:38692/149‑1 (MQ=255) aGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCg < 2:298389/149‑1 (MQ=255) gCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGaa < 3:86213/110‑1 (MQ=255) gCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGaa > 4:86213/1‑110 (MQ=255) ccGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTa < 4:79185/149‑1 (MQ=255) cGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAg > 5:290059/1‑149 (MQ=255) cGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAg > 7:45600/1‑149 (MQ=255) gATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTa > 1:75907/1‑126 (MQ=255) gATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTa < 2:75907/126‑1 (MQ=255) gATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAgg < 2:309285/149‑1 (MQ=255) aTGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAggg > 7:51120/1‑149 (MQ=255) aCTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTg < 6:290059/149‑1 (MQ=255) tGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTg > 7:225386/1‑147 (MQ=255) tGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTg < 8:225386/147‑1 (MQ=255) tGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGc > 3:13399/1‑149 (MQ=255) cagcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGCGCGGCCGACAGCAGGTAGGCACCTATGGCCt < 1:34909/129‑1 (MQ=255) cagcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCt > 2:34909/1‑128 (MQ=255) cagcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGc > 2:111521/1‑147 (MQ=255) agcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTAt > 7:74781/1‑122 (MQ=255) agcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTAt < 8:74781/122‑1 (MQ=255) gcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAgg > 7:103368/1‑149 (MQ=255) cagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAgg > 8:286137/1‑134 (MQ=255) cagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAgg < 7:286137/134‑1 (MQ=255) cagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAggg > 2:196730/1‑149 (MQ=255) agGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCatct > 1:178488/1‑145 (MQ=255) agGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGc < 3:100268/149‑1 (MQ=255) tgccgCCGGCCTGCTGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCg > 5:336434/5‑149 (MQ=255) ggATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCg < 2:55750/149‑1 (MQ=255) gATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCgg > 1:80087/1‑149 (MQ=255) gATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCgg > 3:81028/1‑149 (MQ=255) aTGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGt < 8:45600/149‑1 (MQ=255) cgCCGGCCTGCTGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAgg < 7:284358/103‑1 (MQ=255) cgCCGGCCTGCTGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAgg > 8:284358/2‑104 (MQ=255) cgCCGGCCTGCTGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGt > 1:220430/2‑148 (MQ=255) cgCCGGCCTGCTGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGt > 1:215833/2‑148 (MQ=255) gCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGa > 5:264232/1‑149 (MQ=255) cGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGAc > 6:170025/1‑148 (MQ=255) ggCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGAcc > 4:48497/1‑148 (MQ=255) gCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGACCaa < 5:240221/149‑1 (MQ=255) cagcagGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGACCAAGa < 6:264232/149‑1 (MQ=255) agcagGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAggg < 7:241548/136‑1 (MQ=255) agcagGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAggg > 8:241548/1‑136 (MQ=255) agGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGACCAAGAAcgc < 1:111521/149‑1 (MQ=255) agGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGACCAAGAAcgc > 2:84745/1‑149 (MQ=255) | CCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCG‑GCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGACCAAGAACGC > NC_002947/2313528‑2313823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |