BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,332,055	C→G	6.5%	A200G (GCC→GGC)	PP_2049 →	alcohol dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,332,055	0	C	G	6.5%	343.0 / 6.8	105	A200G (GCC→GGC)	PP_2049	alcohol dehydrogenase
Reads supporting (aligned to +/- strand): ref base C (51/47); new base G (4/3); total (55/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 106 total aligned reads displayed.

ATCGCCATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTGGGGG  >  NC_002947/2331907‑2332201

aTCGCCATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGc                                                                                                                                                    >  1:303609/1‑149 (MQ=255)

   gCCATCGTCACCACCGGCGCCACCACCAATTTGGGCATTTTTTCGCCGCTGCTGTTGCCATACCTGGCAGTGCTCGACGCCGTCT‑GCACCTATCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCa                                                                                                                                                  <  1:255361/149‑1 (MQ=255)

   gCCATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCa                                                                                                                                                  <  5:297810/148‑1 (MQ=255)

   gCCATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCAt                                                                                                                                                 <  8:274997/149‑1 (MQ=255)

    ccATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCATTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATc                                                                                                                                                >  7:153433/1‑149 (MQ=255)

    ccATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCAt                                                                                                                                                 >  5:266173/1‑148 (MQ=255)

    ccATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATc                                                                                                                                                >  3:123275/1‑149 (MQ=255)

      aTCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCg                                                                                                                                               >  1:303309/1‑148 (MQ=255)

         gTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGc                                                                                                                                           <  4:281697/149‑1 (MQ=255)

          tCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGcc                                                                                                                                          <  8:216614/149‑1 (MQ=255)

          tCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGcc                                                                                                                                          >  6:243442/1‑149 (MQ=255)

            accaccGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCta                                                                                                                                        <  5:243442/149‑1 (MQ=255)

              ccccGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCtata                                                                                                                                      <  4:297287/147‑1 (MQ=255)

              caccGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCtata                                                                                                                                      >  3:297287/1‑149 (MQ=255)

                ccGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATAc                                                                                                                                     >  8:11905/1‑148 (MQ=255)

                 cGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATAc                                                                                                                                     >  6:270170/1‑147 (MQ=255)

                   gcgcCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAATGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAgc                                                                                                                                 <  1:160726/149‑1 (MQ=255)

                   gcgcCACCACCAAGATCGGCACTGTTTCGCCGCCGCTGTCGCCAGACCTGGCAGTGCTCGACGCCGGCT‑GCACC‑CTCGGCCGGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAgc                                                                                                                                 <  8:272512/149‑1 (MQ=255)

                           accaAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTcc                                                                                                                          >  2:111757/1‑147 (MQ=255)

                             caAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAAc                                                                                                                       >  5:188416/1‑149 (MQ=255)

                                  tGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAAc                                                                                                                  <  8:204119/149‑1 (MQ=255)

                                     gCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTAT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCg                                                                                                               >  3:34235/1‑149 (MQ=255)

                                      cATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGc                                                                                                              <  2:76411/149‑1 (MQ=255)

                                       aTTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCt                                                                                                             >  6:167224/1‑149 (MQ=255)

                                          gTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTc                                                                                                          >  5:68665/1‑149 (MQ=255)

                                               gccgcTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGcc                                                                                                     >  5:259884/1‑149 (MQ=255)

                                                  gctgctGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCctgc                                                                                                  >  3:158785/1‑149 (MQ=255)

                                                      ctgTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGc                                                                                              >  8:166061/1‑149 (MQ=255)

                                                        gTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGc                                                                                                      <  5:99247/139‑1 (MQ=255)

                                                        gTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGc                                                                                                      >  6:99247/1‑139 (MQ=255)

                                                           gCCAGACCTGGCAGTGCTCGACGCCGTCTGGCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGt                                                                                          >  1:30272/1‑149 (MQ=255)

                                                            ccAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGa                                                                                        <  1:111757/149‑1 (MQ=255)

                                                             cAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAg                                                                                       <  7:241667/149‑1 (MQ=255)

                                                                    ggCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGc                                                                                <  3:133343/149‑1 (MQ=255)

                                                                     gCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTg                                                                                 <  5:103352/147‑1 (MQ=255)

                                                                     gCAGTGCTCCACGCCCTCT‑GCACC‑CTCGGCCTCCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGCTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCGGCTGGCCCGTGAGGCCCTGcc                                                                               >  7:221352/1‑148 (MQ=255)

                                                                       aGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGgc                                                                             >  7:4606/1‑149 (MQ=255)

                                                                            tCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGa                                                                                        >  8:249313/1‑133 (MQ=255)

                                                                            tCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGa                                                                                        <  7:249313/133‑1 (MQ=255)

                                                                            tCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGctgctg                                                                        >  7:271279/1‑149 (MQ=255)

                                                                            tCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGctgctg                                                                        >  8:177514/1‑149 (MQ=255)

                                                                            tCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGctgctg                                                                        >  5:244937/1‑149 (MQ=255)

                                                                             ggACGCGTTCT‑GCTCG‑GTCGGCCTGCTATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATTGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGctgctg                                                                        <  6:244937/147‑1 (MQ=255)

                                                                              gACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGc                                                                                                                                           >  5:307610/1‑80 (MQ=255)

                                                                              gACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGc                                                                                                                                           <  6:307610/80‑1 (MQ=255)

                                                                              gACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGc                                                                      <  7:166061/149‑1 (MQ=255)

                                                                              gACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGc                                                                      >  4:100623/1‑149 (MQ=255)

                                                                                cGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCgg                                                                    <  4:158785/149‑1 (MQ=255)

                                                                                   cGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAgccgcc                                                                                                                             <  7:162569/89‑1 (MQ=255)

                                                                                   cGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAgccgcc                                                                                                                             >  8:162569/1‑89 (MQ=255)

                                                                                          cACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCtt                                                            <  7:177514/148‑1 (MQ=255)

                                                                                           aCC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTg                                                                                 <  4:35897/126‑1 (MQ=255)

                                                                                           aCC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTg                                                                                 >  3:35897/1‑126 (MQ=255)

                                                                                           aCC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGa                                                          <  4:34235/149‑1 (MQ=255)

                                                                                           aCC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGa                                                          <  2:303309/149‑1 (MQ=255)

                                                                                           aCC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCAGGGTGCCTGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGGGAGCCGCTGCGGCTGCTGGCGGATAACCTGGa                                                          >  5:192699/1‑149 (MQ=255)

                                                                                           aCC‑CTCGGCCGGCCATCGGCGGTGAGTGCTGCTACCGGTAGCGATGCCATGGTGCATGCCATCGAAGCCTTTACCAGCCGCCTCATTCGTAACGCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTgt                                                          <  8:221352/149‑2 (MQ=255)

                                                                                             c‑cTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGAcc                                                        >  3:3170/1‑149 (MQ=255)

                                                                                             c‑cTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGAc                                                         >  7:258264/1‑148 (MQ=255)

                                                                                               cTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGAc                                                         >  1:238784/1‑147 (MQ=255)

                                                                                                   gCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCt                                                   <  5:270170/149‑1 (MQ=255)

                                                                                                        ccATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCtgtg                                                <  5:270073/147‑1 (MQ=255)

                                                                                                        ccATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGca                                              >  5:192929/1‑149 (MQ=255)

                                                                                                        ccATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGca                                              >  6:88174/1‑149 (MQ=255)

                                                                                                         cATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGc                                                                      >  2:230521/1‑124 (MQ=255)

                                                                                                         cATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGca                                              >  5:163695/1‑148 (MQ=255)

                                                                                                           tCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACaa                                           <  7:66026/149‑1 (MQ=255)

                                                                                                              gcggTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAAcgg                                        <  5:167224/149‑1 (MQ=255)

                                                                                                                 gTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCg                                                                     <  3:10737/117‑1 (MQ=255)

                                                                                                                 gTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCg                                                                     >  4:10737/1‑117 (MQ=255)

                                                                                                                    aCTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCaa                                  >  8:23058/1‑149 (MQ=255)

                                                                                                                         tgctACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAAcggcgg                                     >  8:24213/1‑141 (MQ=255)

                                                                                                                         tgctACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAAcggcgg                                     <  7:24213/141‑1 (MQ=255)

                                                                                                                           ctACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGc                             <  3:100623/147‑1 (MQ=255)

                                                                                                                               cGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGccc                       >  2:325532/1‑149 (MQ=255)

                                                                                                                                ggTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCtgtg                                                <  2:44333/123‑1 (MQ=255)

                                                                                                                                ggTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCtgtg                                                >  1:44333/1‑123 (MQ=255)

                                                                                                                                 gcttCGATGGCATGCACCATGGCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCtgtg                                                >  6:80692/4‑122 (MQ=255)

                                                                                                                                 gcttCGATGGCATGCACCATGGCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCtgtg                                                <  5:80692/119‑1 (MQ=255)

                                                                                                                                 gTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGc                     >  7:194148/1‑149 (MQ=255)

                                                                                                                                  tATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGcc                    <  1:325532/149‑1 (MQ=255)

                                                                                                                                  cttCGATGGCATGCACCATGGCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGc                     >  1:218375/3‑148 (MQ=255)

                                                                                                                                   ttCGATGGCATGCACCATGGCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCt                                                                                                             <  2:6464/58‑1 (MQ=21)

                                                                                                                                   ttCGATGGCATGCACCATGGCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCt                                                                                                             >  1:6464/2‑59 (MQ=21)

                                                                                                                                   ttCGATGGCATGCACCATGGCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGc                     >  5:50299/2‑147 (MQ=255)

                                                                                                                                    tCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAg                  <  5:88174/149‑1 (MQ=255)

                                                                                                                                      gATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGc                <  4:3170/149‑1 (MQ=255)

                                                                                                                                       aTGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGc                >  6:186391/1‑148 (MQ=255)

                                                                                                                                           cATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGc           >  8:149189/1‑149 (MQ=255)

                                                                                                                                            aTGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCt          >  6:149702/1‑149 (MQ=255)

                                                                                                                                            aTGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCt          >  1:192189/1‑149 (MQ=255)

                                                                                                                                               gTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGtt       <  8:258264/149‑1 (MQ=255)

                                                                                                                                                tGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTg      <  6:259884/149‑1 (MQ=255)

                                                                                                                                                 ccATGGCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTgg     <  2:218375/148‑1 (MQ=255)

                                                                                                                                                  cATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTggg    <  6:163695/149‑1 (MQ=255)

                                                                                                                                                  cATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTgg     <  5:149702/148‑1 (MQ=255)

                                                                                                                                                   aTGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTgggg   >  3:133531/1‑149 (MQ=255)

                                                                                                                                                    tGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTggggg  >  1:96667/1‑149 (MQ=255)

                                                                                                                                                     gCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCtt                                                            >  5:58573/1‑90 (MQ=255)

                                                                                                                                                     gCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCtt                                                            <  6:58573/90‑1 (MQ=255)

ATCGCCATCGTCACCACCGGCGCCACCACCAAGATGGGCATTGTTTCGCCGCTGCTGTTGCCAGACCTGGCAGTGCTCGACGCCGTCT‑GCACC‑CTCGGCCTGCCATCGGCGGTGACTGCTGCTACCGGTATCGATGCCATGGTGCATGCCATCGAAGCCTATACCAGCCGCCTCAAACGTAACCCGCTGTCCAGCCTGCTGGCCCGTGAGGCGCTGCGGCTGCTGGCGGATAACCTTGACCAGGCTGTGCACAACGGCGGCAACCTGCAGGCCCGCCAGGCCATGCTGTTGGGGG  >  NC_002947/2331907‑2332201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`